Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.21740	Hnrph1	heterogeneous nuclear ribonucleoprotein H1	11		59013
Mm.21740	AI642080	expressed sequence AI642080	11		103805
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTTAATT (3) 26.1 0.0261 P8 Cb GC CATCAACAGT (2) 3.3 0.0033 P8 Cb GC AGCGGATATG (2) 1.6 0.0016 P8 Cb GC CAGCGGCCAG (2) 1.6 0.0016 P8 Cb GC CGGGGATTAC (2) 1.6 0.0016 P8 Cb GC GGCTTGTGTA (3) 1.6 0.0016 Cb medulloblastoma TTTGTTAATT (3) 6.9 0.0069 Cb medulloblastoma CGGGGATTAC (2) 2.3 0.0023 P8 GC+1d culture TTTGTTAATT (3) 37.7 0.0377 P8 GC+1d culture CGGGGATTAC (2) 3.4 0.0034 P8 GC+1d culture CTTTTTTGTA (2) 2.3 0.0023 P8 GC+1d culture TTTGTTAATC (3) 2.3 0.0023 P8 GC+1d culture TGTACACAGT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTGTTAATT (3) 17.6 0.0176 P8 GC+SHH+1d culture CGGGGATTAC (2) 5.9 0.0059 P8 GC+SHH+1d culture TTTGTTAATC (3) 3.5 0.0035 P8 GC+SHH+1d culture CAGCGGCCAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CTTTTTTGTA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTACACAGT (2) 1.2 0.0012 3T3 fibroblasts GGCTTGTGTA (3) 3.5 0.0035 E15 cortex TTTGTTAATT (3) 4.9 0.0049 P1 cortex TTTGTTAATT (3) 27.3 0.0273 P1 cortex TGTACACAGT (2) 9.1 0.0091 P1 cortex AAACTGACTA (2) 4.5 0.0045 Hypothalamus TTTGTTAATT (3) 9.1 0.0091 Hypothalamus CGGGGATTAC (2) 1.8 0.0018 E12.5 retina TTTGTTAATT (3) 20.7 0.0207 E12.5 retina CGGGGATTAC (2) 5.6 0.0056 E12.5 retina GGCTTGTGTA (3) 5.6 0.0056 E12.5 retina AAACTGACTA (2) 1.9 0.0019 E12.5 retina CAGCGGCCAG (2) 1.9 0.0019 E12.5 retina TGTACACAGT (2) 1.9 0.0019 E14.5 retina TTTGTTAATT (3) 29.2 0.0292 E14.5 retina CGGGGATTAC (2) 9.1 0.0091 E14.5 retina CATCAACAGT (2) 3.6 0.0036 E14.5 retina CAGCGGCCAG (2) 1.8 0.0018 E14.5 retina CTTTTTTGTA (2) 1.8 0.0018 E16.5 retina TTTGTTAATT (3) 16.3 0.0163 E16.5 retina GGCTTGTGTA (3) 5.4 0.0054 E16.5 retina AGCGGATATG (2) 1.8 0.0018 E16.5 retina CAGCGGCCAG (2) 1.8 0.0018 E16.5 retina CATCAACAGT (2) 1.8 0.0018 E16.5 retina CGGGGATTAC (2) 1.8 0.0018 E16.5 retina CTTTTTTGTA (2) 1.8 0.0018 E16.5 retina TGTACACAGT (2) 1.8 0.0018 E18.5 retina TTTGTTAATT (3) 9.1 0.0091 E18.5 retina CGGGGATTAC (2) 5.5 0.0055 E18.5 retina GGCTTGTGTA (3) 3.6 0.0036 E18.5 retina CATCAACAGT (2) 1.8 0.0018 E18.5 retina CTTTTTTGTA (2) 1.8 0.0018 E18.5 retina TTTGTTAATC (3) 1.8 0.0018 P0.5 retina TTTGTTAATT (3) 15.7 0.0157 P0.5 retina AAACTGACTA (2) 3.9 0.0039 P0.5 retina GGCTTGTGTA (3) 3.9 0.0039 P0.5 retina CATCAACAGT (2) 2 0.002 P2.5 retina TTTGTTAATT (3) 37 0.037 P2.5 retina CGGGGATTAC (2) 3.5 0.0035 P2.5 retina CTTTTTTGTA (2) 3.5 0.0035 P2.5 retina GGCTTGTGTA (3) 3.5 0.0035 P2.5 retina AGCGGATATG (2) 1.8 0.0018 P2.5 retina CATCAACAGT (2) 1.8 0.0018 P2.5 retina GGTTTGTGTA (2) 1.8 0.0018 P4.5 retina TTTGTTAATT (3) 23.8 0.0238 P4.5 retina GGCTTGTGTA (3) 4 0.004 P4.5 retina AAACTGACTA (2) 2 0.002 P4.5 retina CAGCGGCCAG (2) 2 0.002 P4.5 retina CTTTTTTGTA (2) 2 0.002 P4.5 retina TGTACACAGT (2) 2 0.002 P6.5 retina TTTGTTAATT (3) 21.7 0.0217 P6.5 retina AGCGGATATG (2) 3.3 0.0033 P6.5 retina CGGGGATTAC (2) 1.7 0.0017 P6.5 retina GGCTTGTGTA (3) 1.7 0.0017 P10.5 crx- retina TTTGTTAATT (3) 18.6 0.0186 P10.5 crx- retina CATCAACAGT (2) 1.9 0.0019 P10.5 crx- retina GGCTTGTGTA (3) 1.9 0.0019 P10.5 crx+ retina TTTGTTAATT (3) 11.5 0.0115 P10.5 crx+ retina CAGCGGCCAG (2) 1.9 0.0019 P10.5 crx+ retina CGGGGATTAC (2) 1.9 0.0019 P10.5 crx+ retina TGTACACAGT (2) 1.9 0.0019 Adult retinal TTTGTTAATT (3) 9.3 0.0093 Adult retinal AGCGGATATG (2) 1.9 0.0019 Adult retinal TGTACACAGT (2) 1.9 0.0019 ONL TTTGTTAATT (3) 15.3 0.0153 ONL GGTTTGTGTA (2) 3.8 0.0038 ONL CGGGGATTAC (2) 1.9 0.0019 ONL CTTTTTTGTA (2) 1.9 0.0019