Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.217787	Atp6v1a1	ATPase, H+ transporting, V1 subunit A, isoform 1	16		11964
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | ion transport | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex | transport
Human Homolog	ATP6V1A[ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 138 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGGAAGTG (6) 8.2 0.0082 P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC GTAACCTTAG (4) 3.3 0.0033 P8 Cb GC GAAAATGTGA (5) 1.6 0.0016 P8 Cb GC TACTCTGTTG (2) 1.6 0.0016 P8 Cb GC TCTACACAGT 1.6 0.0016 P8 Cb GC TTTTTAAATG (4) 1.6 0.0016 Cb medulloblastoma CTCAGAAAGC (5) 11.6 0.0116 Cb medulloblastoma CCACCCTGGC (4) 4.6 0.0046 Cb medulloblastoma TGTGGAAGTG (6) 4.6 0.0046 Cb medulloblastoma GCTCACAGAA (3) 2.3 0.0023 Cb medulloblastoma TACTCTGTTG (2) 2.3 0.0023 Cb medulloblastoma TCTACACAGT 2.3 0.0023 Cb medulloblastoma TTTTTAAATG (4) 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TCTACACAGT 6.8 0.0068 P8 GC+1d culture GTAACCTTAG (4) 5.7 0.0057 P8 GC+1d culture TGTGGAAGTG (6) 5.7 0.0057 P8 GC+1d culture TTTTTAAATG (4) 5.7 0.0057 P8 GC+1d culture CTCAGAAAGC (5) 4.6 0.0046 P8 GC+1d culture GCTCACAGAA (3) 2.3 0.0023 P8 GC+1d culture TACTCTGTTG (2) 2.3 0.0023 P8 GC+1d culture CTCAGAAGCT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTAAATG (4) 3.5 0.0035 P8 GC+SHH+1d culture CTCAGAAAGC (5) 2.3 0.0023 P8 GC+SHH+1d culture TACTCTGTTG (2) 2.3 0.0023 P8 GC+SHH+1d culture CCACCCTGGC (4) 1.2 0.0012 P8 GC+SHH+1d culture CTCAGAAGCT (3) 1.2 0.0012 P8 GC+SHH+1d culture GCTCACAGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GTAACCTTAG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGTGGAAGTG (6) 1.2 0.0012 3T3 fibroblasts CTCAGAAGCT (3) 7 0.007 3T3 fibroblasts TACTCTGTTG (2) 7 0.007 3T3 fibroblasts GTTTCTGTAG (3) 3.5 0.0035 3T3 fibroblasts TCTACACAGT 3.5 0.0035 E15 cortex CTCAGAAAGC (5) 4.9 0.0049 E15 cortex CTCAGAAGCT (3) 4.9 0.0049 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TTTTTAAATG (4) 13.6 0.0136 P1 cortex TCTACACAGT 9.1 0.0091 P1 cortex CCACCCTGGC (4) 4.5 0.0045 P1 cortex CTCAGAAGCT (3) 4.5 0.0045 P1 cortex TACTCTGTTG (2) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus CTCAGAAAGC (5) 5.4 0.0054 Hypothalamus TCTACACAGT 5.4 0.0054 Hypothalamus TGTGGAAGTG (6) 5.4 0.0054 Hypothalamus CCACCCTGGC (4) 1.8 0.0018 Hypothalamus GAAAATGTGA (5) 1.8 0.0018 Hypothalamus GTAACCTTAG (4) 1.8 0.0018 Hypothalamus GTTTCTGTAG (3) 1.8 0.0018 Hypothalamus TTACAATGTG 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E12.5 retina TTTTTAAATG (4) 5.6 0.0056 E12.5 retina GCTCACAGAA (3) 3.8 0.0038 E12.5 retina GTAACCTTAG (4) 1.9 0.0019 E12.5 retina TACTCTGTTG (2) 1.9 0.0019 E12.5 retina TGTGGAAGTG (6) 1.9 0.0019 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TTTTTAAATG (4) 10.9 0.0109 E14.5 retina GCTCACAGAA (3) 7.3 0.0073 E14.5 retina GAAAATGTGA (5) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TGTGGAAGTG (6) 3.6 0.0036 E16.5 retina CCACCCTGGC (4) 1.8 0.0018 E16.5 retina GCTCACAGAA (3) 1.8 0.0018 E16.5 retina GTAACCTTAG (4) 1.8 0.0018 E16.5 retina TACTCTGTTG (2) 1.8 0.0018 E16.5 retina TTTTTAAATG (4) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina GCTCACAGAA (3) 9.1 0.0091 E18.5 retina TTTTTAAATG (4) 9.1 0.0091 E18.5 retina GTTTCTGTAG (3) 3.6 0.0036 E18.5 retina GTAACCTTAG (4) 1.8 0.0018 E18.5 retina TGTGGAAGTG (6) 1.8 0.0018 P0.5 retina TGTGGAAGTG (6) 11.8 0.0118 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GTAACCTTAG (4) 5.9 0.0059 P0.5 retina TTTTTAAATG (4) 5.9 0.0059 P0.5 retina TCTACACAGT 3.9 0.0039 P0.5 retina CTCAGAAAGC (5) 2 0.002 P0.5 retina GCTCACAGAA (3) 2 0.002 P2.5 retina TGTGGAAGTG (6) 7 0.007 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina CTCAGAAAGC (5) 5.3 0.0053 P2.5 retina GCTCACAGAA (3) 5.3 0.0053 P2.5 retina GTAACCTTAG (4) 5.3 0.0053 P2.5 retina GTTTCTGTAG (3) 3.5 0.0035 P2.5 retina TCTACACAGT 3.5 0.0035 P2.5 retina AGACCTTGTG (2) 1.8 0.0018 P2.5 retina TTTTTAAATG (4) 1.8 0.0018 P4.5 retina TTTTTAAATG (4) 11.9 0.0119 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TGTGGAAGTG (6) 4 0.004 P4.5 retina CTCAGAAAGC (5) 2 0.002 P4.5 retina GCTCACAGAA (3) 2 0.002 P4.5 retina GTAACCTTAG (4) 2 0.002 P4.5 retina GTTTCTGTAG (3) 2 0.002 P4.5 retina TTACAATGTG 2 0.002 P6.5 retina TGTGGAAGTG (6) 8.3 0.0083 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina CTCAGAAAGC (5) 6.7 0.0067 P6.5 retina TCTACACAGT 6.7 0.0067 P6.5 retina GCTCACAGAA (3) 5 0.005 P6.5 retina TTTTTAAATG (4) 3.3 0.0033 P6.5 retina AAAATTCAAG (4) 1.7 0.0017 P6.5 retina GTAACCTTAG (4) 1.7 0.0017 P6.5 retina TACTCTGTTG (2) 1.7 0.0017 P10.5 crx- retina TGTGGAAGTG (6) 9.3 0.0093 P10.5 crx- retina TCTACACAGT 3.7 0.0037 P10.5 crx- retina AAAATTCAAG (4) 1.9 0.0019 P10.5 crx- retina TTTTTAAATG (4) 1.9 0.0019 P10.5 crx+ retina CTCAGAAAGC (5) 7.7 0.0077 P10.5 crx+ retina GTAACCTTAG (4) 5.8 0.0058 P10.5 crx+ retina TCTACACAGT 5.8 0.0058 P10.5 crx+ retina GCTCACAGAA (3) 3.8 0.0038 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 P10.5 crx+ retina TGTGGAAGTG (6) 1.9 0.0019 P10.5 crx+ retina TTACAATGTG 1.9 0.0019 P10.5 crx+ retina TTTTTAAATG (4) 1.9 0.0019 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal TGTGGAAGTG (6) 5.6 0.0056 Adult retinal CTCAGAAAGC (5) 3.7 0.0037 Adult retinal CTCAGAAGCT (3) 3.7 0.0037 Adult retinal GCTCACAGAA (3) 1.9 0.0019 Adult retinal TACTCTGTTG (2) 1.9 0.0019 Adult retinal TCTACACAGT 1.9 0.0019 ONL AGACCTTGTG (2) 3.8 0.0038 ONL GAAAATGTGA (5) 3.8 0.0038 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL AAAATTCAAG (4) 1.9 0.0019 ONL GCTCACAGAA (3) 1.9 0.0019 ONL GTAACCTTAG (4) 1.9 0.0019 ONL GTTTCTGTAG (3) 1.9 0.0019 ONL TTTTTAAATG (4) 1.9 0.0019