Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.217787	Atp6v1a1	ATPase, H+ transporting, V1 subunit A, isoform 1	16		11964
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | ion transport | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex | transport
Human Homolog	ATP6V1A[ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 138 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAATGTGA (3) GTAACCTTAG TACTCTGTTG (2) TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 22.8 0.0228 Cb medulloblastoma CCACCCTGGC CTCAGAAAGC (2) GCTCACAGAA (2) TACTCTGTTG (2) TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 32.3 0.0323 P8 GC+1d culture CTCAGAAAGC (2) CTCAGAAGCT GCTCACAGAA (2) GTAACCTTAG TACTCTGTTG (2) TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 47.9 0.0479 P8 GC+SHH+1d culture CCACCCTGGC CTCAGAAAGC (2) CTCAGAAGCT GCTCACAGAA (2) GTAACCTTAG TACTCTGTTG (2) TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 20 0.02 3T3 fibroblasts CTCAGAAGCT GTTTCTGTAG TACTCTGTTG (2) TCTACACAGT 21 0.021 E15 cortex CTCAGAAAGC (2) CTCAGAAGCT TTTTTTTTTT (2) 14.7 0.0147 P1 cortex CCACCCTGGC CTCAGAAGCT TACTCTGTTG (2) TCTACACAGT TTTTTAAATG (3) TTTTTTTTTT (2) 40.7 0.0407 Hypothalamus CCACCCTGGC CTCAGAAAGC (2) GAAAATGTGA (3) GTAACCTTAG GTTTCTGTAG TCTACACAGT TGTGGAAGTG (2) TTACAATGTG TTTTTTTTTT (2) 32.4 0.0324 E12.5 retina GCTCACAGAA (2) GTAACCTTAG TACTCTGTTG (2) TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 22.6 0.0226 E14.5 retina GAAAATGTGA (3) GCTCACAGAA (2) TTTTTAAATG (3) TTTTTTTTTT (2) 43.7 0.0437 E16.5 retina CCACCCTGGC GCTCACAGAA (2) GTAACCTTAG TACTCTGTTG (2) TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 18 0.018 E18.5 retina GCTCACAGAA (2) GTAACCTTAG GTTTCTGTAG TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 36.3 0.0363 P0.5 retina CTCAGAAAGC (2) GCTCACAGAA (2) GTAACCTTAG TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 41.3 0.0413 P2.5 retina AGACCTTGTG CTCAGAAAGC (2) GCTCACAGAA (2) GTAACCTTAG GTTTCTGTAG TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 40.5 0.0405 P4.5 retina CTCAGAAAGC (2) GCTCACAGAA (2) GTAACCTTAG GTTTCTGTAG TGTGGAAGTG (2) TTACAATGTG TTTTTAAATG (3) TTTTTTTTTT (2) 35.8 0.0358 P6.5 retina AAAATTCAAG CTCAGAAAGC (2) GCTCACAGAA (2) GTAACCTTAG TACTCTGTTG (2) TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) TTTTTTTTTT (2) 43.4 0.0434 P10.5 crx- retina AAAATTCAAG TCTACACAGT TGTGGAAGTG (2) TTTTTAAATG (3) 16.8 0.0168 P10.5 crx+ retina CTCAGAAAGC (2) GCTCACAGAA (2) GTAACCTTAG TCTACACAGT TGTGGAAGTG (2) TTACAATGTG TTTTTAAATG (3) TTTTTTTTTT (2) 32.6 0.0326 Adult retinal CTCAGAAAGC (2) CTCAGAAGCT GCTCACAGAA (2) TACTCTGTTG (2) TCTACACAGT TGTGGAAGTG (2) TTTTTTTTTT (2) 26.1 0.0261 ONL AAAATTCAAG AGACCTTGTG GAAAATGTGA (3) GCTCACAGAA (2) GTAACCTTAG GTTTCTGTAG TTTTTAAATG (3) TTTTTTTTTT (2) 20.9 0.0209