Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.217787	Atp6v1a1	ATPase, H+ transporting, V1 subunit A, isoform 1	16		11964
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | ion transport | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex | transport
Human Homolog	ATP6V1A[ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTAACCTTAG 3.3 0.0033 P8 Cb GC TACTCTGTTG (2) 1.6 0.0016 P8 Cb GC TCTACACAGT 1.6 0.0016 Cb medulloblastoma CTCAGAAAGC (2) 11.6 0.0116 Cb medulloblastoma CCACCCTGGC 4.6 0.0046 Cb medulloblastoma TACTCTGTTG (2) 2.3 0.0023 Cb medulloblastoma TCTACACAGT 2.3 0.0023 P8 GC+1d culture TCTACACAGT 6.8 0.0068 P8 GC+1d culture GTAACCTTAG 5.7 0.0057 P8 GC+1d culture CTCAGAAAGC (2) 4.6 0.0046 P8 GC+1d culture TACTCTGTTG (2) 2.3 0.0023 P8 GC+SHH+1d culture CTCAGAAAGC (2) 2.3 0.0023 P8 GC+SHH+1d culture TACTCTGTTG (2) 2.3 0.0023 P8 GC+SHH+1d culture CCACCCTGGC 1.2 0.0012 P8 GC+SHH+1d culture GTAACCTTAG 1.2 0.0012 3T3 fibroblasts TACTCTGTTG (2) 7 0.007 3T3 fibroblasts TCTACACAGT 3.5 0.0035 E15 cortex CTCAGAAAGC (2) 4.9 0.0049 P1 cortex TCTACACAGT 9.1 0.0091 P1 cortex CCACCCTGGC 4.5 0.0045 P1 cortex TACTCTGTTG (2) 4.5 0.0045 Hypothalamus CTCAGAAAGC (2) 5.4 0.0054 Hypothalamus TCTACACAGT 5.4 0.0054 Hypothalamus CCACCCTGGC 1.8 0.0018 Hypothalamus GTAACCTTAG 1.8 0.0018 Hypothalamus TTACAATGTG 1.8 0.0018 E12.5 retina GTAACCTTAG 1.9 0.0019 E12.5 retina TACTCTGTTG (2) 1.9 0.0019 E16.5 retina CCACCCTGGC 1.8 0.0018 E16.5 retina GTAACCTTAG 1.8 0.0018 E16.5 retina TACTCTGTTG (2) 1.8 0.0018 E18.5 retina GTAACCTTAG 1.8 0.0018 P0.5 retina GTAACCTTAG 5.9 0.0059 P0.5 retina TCTACACAGT 3.9 0.0039 P0.5 retina CTCAGAAAGC (2) 2 0.002 P2.5 retina CTCAGAAAGC (2) 5.3 0.0053 P2.5 retina GTAACCTTAG 5.3 0.0053 P2.5 retina TCTACACAGT 3.5 0.0035 P4.5 retina CTCAGAAAGC (2) 2 0.002 P4.5 retina GTAACCTTAG 2 0.002 P4.5 retina TTACAATGTG 2 0.002 P6.5 retina CTCAGAAAGC (2) 6.7 0.0067 P6.5 retina TCTACACAGT 6.7 0.0067 P6.5 retina GTAACCTTAG 1.7 0.0017 P6.5 retina TACTCTGTTG (2) 1.7 0.0017 P10.5 crx- retina TCTACACAGT 3.7 0.0037 P10.5 crx+ retina CTCAGAAAGC (2) 7.7 0.0077 P10.5 crx+ retina GTAACCTTAG 5.8 0.0058 P10.5 crx+ retina TCTACACAGT 5.8 0.0058 P10.5 crx+ retina TTACAATGTG 1.9 0.0019 Adult retinal CTCAGAAAGC (2) 3.7 0.0037 Adult retinal TACTCTGTTG (2) 1.9 0.0019 Adult retinal TCTACACAGT 1.9 0.0019 ONL GTAACCTTAG 1.9 0.0019