Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.22130
2610007O09Rik
RIKEN cDNA 2610007O09 gene
2
66579
Mm.22130
Rpn2
ribophorin II
2
2 91.0 cM
20014
Mm.22130
Rpn2-rs1
ribophorin 2, related sequence 1
7
7 66.0 cM
20015
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGTTACATC
(
5
)
11.4
0.0114
P8 Cb GC
CTTGGGCCCA
(
3
)
1.6
0.0016
P8 Cb GC
TTTGGGCCCA
(
4
)
1.6
0.0016
Cb medulloblastoma
CAGTTACATC
(
5
)
6.9
0.0069
Cb medulloblastoma
TTTGGGCCCA
(
4
)
4.6
0.0046
Cb medulloblastoma
GTGTGAAAGG
(
4
)
2.3
0.0023
Cb medulloblastoma
TAAGCACAGC
(
3
)
2.3
0.0023
P8 GC+1d culture
TTTGGGCCCA
(
4
)
9.1
0.0091
P8 GC+1d culture
CAGTTACATC
(
5
)
6.8
0.0068
P8 GC+1d culture
TAAGCACAGG
(
5
)
2.3
0.0023
P8 GC+1d culture
TAAGCACAGC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAGTTACATC
(
5
)
11.7
0.0117
P8 GC+SHH+1d culture
TTTGGGCCCA
(
4
)
5.9
0.0059
3T3 fibroblasts
TTTGGGCCCA
(
4
)
10.5
0.0105
3T3 fibroblasts
CAGTTACATC
(
5
)
3.5
0.0035
3T3 fibroblasts
GTGTGAAAGG
(
4
)
3.5
0.0035
3T3 fibroblasts
TTGGGCCCAG
(
4
)
3.5
0.0035
E15 cortex
GTGTGAAAGG
(
4
)
9.9
0.0099
E15 cortex
TTTGGGCCCA
(
4
)
4.9
0.0049
P1 cortex
GTGTGAAAGG
(
4
)
4.5
0.0045
P1 cortex
TAAGCACAGG
(
5
)
4.5
0.0045
P1 cortex
TTTGGGCCCA
(
4
)
4.5
0.0045
Hypothalamus
CAGTTACATC
(
5
)
5.4
0.0054
Hypothalamus
TTTGGGCCCA
(
4
)
5.4
0.0054
Hypothalamus
CAACACCAAT
(
3
)
1.8
0.0018
E12.5 retina
TTTGGGCCCA
(
4
)
13.1
0.0131
E12.5 retina
CAGTTACATC
(
5
)
7.5
0.0075
E12.5 retina
TAAGCACAGC
(
3
)
1.9
0.0019
E14.5 retina
TTTGGGCCCA
(
4
)
7.3
0.0073
E14.5 retina
CAGTTACATC
(
5
)
5.5
0.0055
E14.5 retina
ATTTTGGAAT
(
4
)
1.8
0.0018
E14.5 retina
TAAGCACAGC
(
3
)
1.8
0.0018
E16.5 retina
CAGTTACATC
(
5
)
12.7
0.0127
E16.5 retina
TTTGGGCCCA
(
4
)
10.9
0.0109
E16.5 retina
TAAGCACAGC
(
3
)
3.6
0.0036
E16.5 retina
ATTTTGGAAT
(
4
)
1.8
0.0018
E16.5 retina
TAAGCACAGG
(
5
)
1.8
0.0018
E18.5 retina
CAGTTACATC
(
5
)
9.1
0.0091
E18.5 retina
GTGTGAAAGG
(
4
)
5.5
0.0055
E18.5 retina
TTTGGGCCCA
(
4
)
5.5
0.0055
E18.5 retina
TAAGCACAGC
(
3
)
3.6
0.0036
P0.5 retina
CAGTTACATC
(
5
)
9.8
0.0098
P0.5 retina
TTTGGGCCCA
(
4
)
9.8
0.0098
P0.5 retina
TAAGCACAGG
(
5
)
5.9
0.0059
P2.5 retina
CAGTTACATC
(
5
)
10.6
0.0106
P2.5 retina
TTTGGGCCCA
(
4
)
8.8
0.0088
P2.5 retina
TAAGCACAGG
(
5
)
1.8
0.0018
P4.5 retina
CAGTTACATC
(
5
)
15.9
0.0159
P4.5 retina
TTTGGGCCCA
(
4
)
7.9
0.0079
P4.5 retina
CTTGGGCCCA
(
3
)
2
0.002
P6.5 retina
TTTGGGCCCA
(
4
)
13.3
0.0133
P6.5 retina
CAGTTACATC
(
5
)
3.3
0.0033
P6.5 retina
GTGTGAAAGG
(
4
)
3.3
0.0033
P6.5 retina
CAACACCAAT
(
3
)
1.7
0.0017
P10.5 crx- retina
ATTTTGGAAT
(
4
)
5.6
0.0056
P10.5 crx- retina
CAGTTACATC
(
5
)
5.6
0.0056
P10.5 crx- retina
TTTGGGCCCA
(
4
)
5.6
0.0056
P10.5 crx+ retina
CAGTTACATC
(
5
)
7.7
0.0077
P10.5 crx+ retina
TTTGGGCCCA
(
4
)
7.7
0.0077
P10.5 crx+ retina
GTGTGAAAGG
(
4
)
5.8
0.0058
P10.5 crx+ retina
ATTTTGGAAT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TAAGCACAGG
(
5
)
1.9
0.0019
Adult retinal
TTTGGGCCCA
(
4
)
9.3
0.0093
Adult retinal
TTGGGCCCAG
(
4
)
3.7
0.0037
Adult retinal
CAGTTACATC
(
5
)
1.9
0.0019
Adult retinal
CTTGGGCCCA
(
3
)
1.9
0.0019
Adult retinal
TAAGCACAGG
(
5
)
1.9
0.0019
ONL
TTTGGGCCCA
(
4
)
5.7
0.0057
ONL
CAACACCAAT
(
3
)
1.9
0.0019
ONL
TAAGCACAGG
(
5
)
1.9
0.0019
