Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22347	Pnn	pinin	12	12 23.0 cM	18949
Human Homolog	PNN[pinin, desmosome associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTAAAAAT (2) 3.3 0.0033 Cb medulloblastoma CCAATCTGTG (2) 2.3 0.0023 P8 GC+1d culture CAATTCTTAA CCAATCTGTG (2) 2.2 0.0022 P8 GC+SHH+1d culture CCAATCTGTG (2) TTGTAAAAAT (2) TTTCAGTTAT 4.7 0.0047 3T3 fibroblasts CCAATCTGTG (2) TTTCAGTTAT 7 0.007 E15 cortex CCAATCTGTG (2) GATGAGAAGG (2) TTGTAAAAAT (2) TTTCAGTTAT 24.6 0.0246 P1 cortex CCAATCTGTG (2) 4.5 0.0045 Hypothalamus CAATTCTTAA CCAATCTGTG (2) GATGAGAAGG (2) TTGTAAAAAT (2) 9 0.009 E12.5 retina CCAATCTGTG (2) TTGTAAAAAT (2) 7.5 0.0075 E14.5 retina CAATTCTTAA CCAATCTGTG (2) TTGTAAAAAT (2) 9.1 0.0091 E16.5 retina CCAATCTGTG (2) TTGTAAAAAT (2) 10.8 0.0108 E18.5 retina CAATTCTTAA CCAATCTGTG (2) TTGTAAAAAT (2) 7.2 0.0072 P0.5 retina CAATTCTTAA CCAATCTGTG (2) 11.8 0.0118 P2.5 retina CCAATCTGTG (2) 5.3 0.0053 P4.5 retina CAATTCTTAA CCAATCTGTG (2) TTGTAAAAAT (2) TTTCAGTTAT 8 0.008 P6.5 retina CCAATCTGTG (2) GATGAGAAGG (2) TTGTAAAAAT (2) 8.4 0.0084 P10.5 crx- retina CAATTCTTAA CCAATCTGTG (2) 3.8 0.0038 P10.5 crx+ retina CCAATCTGTG (2) 1.9 0.0019 Adult retinal CCAATCTGTG (2) TTGTAAAAAT (2) 7.5 0.0075 ONL CCAATCTGTG (2) 1.9 0.0019