Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.231395 Ctsdcathepsin D 7  4 50.0 cM  13033 
 Gene Ontology aspartic-type endopeptidase activity | cathepsin D activity | hydrolase activity | lysosome | mitochondrion | pepsin A activity | peptidase activity | proteolysis and peptidolysis
 Human Homolog CTSD[cathepsin D (lysosomal aspartyl protease)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCTCAGCCTG (4)27.70.0277
P8 Cb GCGACCAGTGGA (6)9.80.0098
P8 Cb GCAAAAAAAGAA (15)1.60.0016
P8 Cb GCCCTTTCCAGG (4)1.60.0016
P8 Cb GCGGAATGGACA (7)1.60.0016
Cb medulloblastomaCCTCAGCCTG (4)27.70.0277
Cb medulloblastomaGACCAGTGGA (6)20.80.0208
Cb medulloblastomaTCAGCTCTGA (3)4.60.0046
Cb medulloblastomaAAAAAAAGAA (15)2.30.0023
Cb medulloblastomaAAGACTCCCG (3)2.30.0023
Cb medulloblastomaCCTTCCCAGA (3)2.30.0023
Cb medulloblastomaTTCTGTTCTG (3)2.30.0023
P8 GC+1d cultureCCTCAGCCTG (4)35.40.0354
P8 GC+1d cultureGACCAGTGGA (6)4.60.0046
P8 GC+1d cultureGGTACCCCTC (3)3.40.0034
P8 GC+1d cultureCCTTCCCAGA (3)2.30.0023
P8 GC+1d cultureAAAAAAAGAA (15)1.10.0011
P8 GC+1d cultureCAGCTCATCG (2)1.10.0011
P8 GC+1d cultureCCTCACCCTG (4)1.10.0011
P8 GC+1d cultureGACCCAGTGA (2)1.10.0011
P8 GC+1d cultureGCCTTCCAGT1.10.0011
P8 GC+1d cultureGGAATGGACA (7)1.10.0011
P8 GC+1d cultureGGTCCCCACA (3)1.10.0011
P8 GC+1d cultureTTAGTCTGAC (3)1.10.0011
P8 GC+SHH+1d cultureCCTCAGCCTG (4)31.60.0316
P8 GC+SHH+1d cultureGACCAGTGGA (6)3.50.0035
P8 GC+SHH+1d cultureCAGCTCATCG (2)2.30.0023
P8 GC+SHH+1d cultureGCCTTCCAGT2.30.0023
P8 GC+SHH+1d cultureGGTACCCCTC (3)2.30.0023
P8 GC+SHH+1d cultureCCTCACCCTG (4)1.20.0012
P8 GC+SHH+1d cultureCCTTCCCAGG (3)1.20.0012
P8 GC+SHH+1d cultureCCTTTCCAGG (4)1.20.0012
P8 GC+SHH+1d cultureGGAGGGCGGC (3)1.20.0012
3T3 fibroblastsCCTCAGCCTG (4)143.70.1437
3T3 fibroblastsGACCAGTGGA (6)10.50.0105
3T3 fibroblastsCCTCACCCTG (4)70.007
3T3 fibroblastsGGTACCCCTC (3)3.50.0035
E15 cortexCCTCAGCCTG (4)34.60.0346
E15 cortexCCTTCCCAGA (3)9.90.0099
E15 cortexGACCAGTGGA (6)9.90.0099
E15 cortexCCTCACCCTG (4)4.90.0049
E15 cortexGACCCAGTGA (2)4.90.0049
P1 cortexCCTCAGCCTG (4)13.60.0136
P1 cortexCCTTCCCAGA (3)9.10.0091
HypothalamusCCTCAGCCTG (4)10.90.0109
HypothalamusTTAGTCTGAC (3)9.10.0091
HypothalamusGACCAGTGGA (6)7.20.0072
HypothalamusCAGCTCATCG (2)3.60.0036
HypothalamusGGAGGGCGGC (3)3.60.0036
HypothalamusTCAGCTCTGA (3)3.60.0036
HypothalamusTTCTGTTCTG (3)3.60.0036
HypothalamusAAAAAAAGAA (15)1.80.0018
HypothalamusAAGACTCCCG (3)1.80.0018
HypothalamusCCTTCCCAGA (3)1.80.0018
HypothalamusGGAATGGACA (7)1.80.0018
HypothalamusTAAGTCCTGA (2)1.80.0018
E12.5 retinaCCTCAGCCTG (4)18.80.0188
E12.5 retinaGACCAGTGGA (6)9.40.0094
E12.5 retinaAAAAAAAGAA (15)1.90.0019
E12.5 retinaCCTTCCCAGA (3)1.90.0019
E12.5 retinaCCTTCCCAGG (3)1.90.0019
E12.5 retinaGGTACCCCTC (3)1.90.0019
E14.5 retinaCCTCAGCCTG (4)3.60.0036
E14.5 retinaCCTTCCCAGG (3)3.60.0036
E14.5 retinaGACCAGTGGA (6)3.60.0036
E14.5 retinaTCAGCTCTGA (3)3.60.0036
E14.5 retinaCCTTCCAGGA (5)1.80.0018
E14.5 retinaGGTACCCCTC (3)1.80.0018
E14.5 retinaGGTCCCCACA (3)1.80.0018
E14.5 retinaTAAGTCCTGA (2)1.80.0018
E16.5 retinaCCTCAGCCTG (4)9.10.0091
E16.5 retinaCCTTCCAGGA (5)1.80.0018
E16.5 retinaCCTTCCCAGA (3)1.80.0018
E16.5 retinaCCTTCCCAGG (3)1.80.0018
E16.5 retinaCCTTTCCAGG (4)1.80.0018
E16.5 retinaGCTCAGCCCT (2)1.80.0018
E16.5 retinaGGTACCCCTC (3)1.80.0018
E16.5 retinaGGTCCCCACA (3)1.80.0018
E18.5 retinaCCTCAGCCTG (4)14.60.0146
E18.5 retinaGACCAGTGGA (6)1.80.0018
E18.5 retinaGCCTTCCAGT1.80.0018
E18.5 retinaGGTACCCCTC (3)1.80.0018
E18.5 retinaTAAGTCCTGA (2)1.80.0018
P0.5 retinaGACCAGTGGA (6)7.90.0079
P0.5 retinaCCTCACCCTG (4)5.90.0059
P0.5 retinaCCTCAGCCTG (4)5.90.0059
P0.5 retinaGGAGGGCGGC (3)20.002
P2.5 retinaCCTCAGCCTG (4)14.10.0141
P2.5 retinaAAAAAAAGAA (15)70.007
P2.5 retinaCAGCTCATCG (2)1.80.0018
P2.5 retinaCCTTTCCAGG (4)1.80.0018
P2.5 retinaGACCAGTGGA (6)1.80.0018
P2.5 retinaGACCCAGTGA (2)1.80.0018
P2.5 retinaGCTCAGCCCT (2)1.80.0018
P2.5 retinaGGTACCCCTC (3)1.80.0018
P2.5 retinaTCAGCTCTGA (3)1.80.0018
P4.5 retinaCCTCAGCCTG (4)11.90.0119
P4.5 retinaGACCAGTGGA (6)40.004
P4.5 retinaGGAGGGCGGC (3)40.004
P4.5 retinaCAGCTCATCG (2)20.002
P4.5 retinaGCCTTCCAGT20.002
P4.5 retinaGCTCAGCCCT (2)20.002
P4.5 retinaGGTACCCCTC (3)20.002
P4.5 retinaTCAGCTCTGA (3)20.002
P6.5 retinaCCTCAGCCTG (4)26.70.0267
P6.5 retinaGACCAGTGGA (6)50.005
P6.5 retinaCCTTTCCAGG (4)3.30.0033
P6.5 retinaGGAGGGCGGC (3)1.70.0017
P6.5 retinaGGTACCCCTC (3)1.70.0017
P6.5 retinaGGTCCCCACA (3)1.70.0017
P10.5 crx- retinaCCTCAGCCTG (4)390.039
P10.5 crx- retinaCCTTCCCAGA (3)130.013
P10.5 crx- retinaGACCAGTGGA (6)9.30.0093
P10.5 crx- retinaCCTTCCCAGG (3)1.90.0019
P10.5 crx- retinaGGAGGGCGGC (3)1.90.0019
P10.5 crx- retinaGGTACCCCTC (3)1.90.0019
P10.5 crx- retinaTAAGTCCTGA (2)1.90.0019
P10.5 crx+ retinaCCTCAGCCTG (4)26.90.0269
P10.5 crx+ retinaGACCAGTGGA (6)13.50.0135
P10.5 crx+ retinaTCAGCTCTGA (3)5.80.0058
P10.5 crx+ retinaCCTTCCCAGA (3)3.80.0038
P10.5 crx+ retinaCCTTCCAGGA (5)1.90.0019
P10.5 crx+ retinaGGAGGGCGGC (3)1.90.0019
Adult retinalCCTCAGCCTG (4)20.40.0204
Adult retinalGACCAGTGGA (6)5.60.0056
Adult retinalAAAAAAAGAA (15)3.70.0037
Adult retinalCCTCACCCTG (4)3.70.0037
Adult retinalCCTTCCAGGA (5)1.90.0019
Adult retinalGGTACCCCTC (3)1.90.0019
Adult retinalTAAGTCCTGA (2)1.90.0019
Adult retinalTCAGCTCTGA (3)1.90.0019
Adult retinalTTCTGTTCTG (3)1.90.0019
ONLCCTCAGCCTG (4)11.50.0115
ONLGACCAGTGGA (6)5.70.0057
ONLAAAAAAAGAA (15)1.90.0019
ONLGGAATGGACA (7)1.90.0019