Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.231395 Ctsdcathepsin D 7  4 50.0 cM  13033 
 Gene Ontology aspartic-type endopeptidase activity | cathepsin D activity | hydrolase activity | lysosome | mitochondrion | pepsin A activity | peptidase activity | proteolysis and peptidolysis
 Human Homolog CTSD[cathepsin D (lysosomal aspartyl protease)]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAAAAAAGAA
CCTCAGCCTG (2)
CCTTTCCAGG (4)
GACCAGTGGA (2)
GGAATGGACA (3)
42.30.0423
Cb medulloblastomaAAAAAAAGAA
AAGACTCCCG
CCTCAGCCTG (2)
CCTTCCCAGA
GACCAGTGGA (2)
TCAGCTCTGA
TTCTGTTCTG
62.30.0623
P8 GC+1d cultureAAAAAAAGAA
CAGCTCATCG
CCTCACCCTG (2)
CCTCAGCCTG (2)
CCTTCCCAGA
GACCAGTGGA (2)
GACCCAGTGA
GCCTTCCAGT
GGAATGGACA (3)
GGTACCCCTC
GGTCCCCACA
TTAGTCTGAC (2)
54.50.0545
P8 GC+SHH+1d cultureCAGCTCATCG
CCTCACCCTG (2)
CCTCAGCCTG (2)
CCTTCCCAGG
CCTTTCCAGG (4)
GACCAGTGGA (2)
GCCTTCCAGT
GGAGGGCGGC
GGTACCCCTC
46.80.0468
3T3 fibroblastsCCTCACCCTG (2)
CCTCAGCCTG (2)
GACCAGTGGA (2)
GGTACCCCTC
164.70.1647
E15 cortexCCTCACCCTG (2)
CCTCAGCCTG (2)
CCTTCCCAGA
GACCAGTGGA (2)
GACCCAGTGA
64.20.0642
P1 cortexCCTCAGCCTG (2)
CCTTCCCAGA
22.70.0227
HypothalamusAAAAAAAGAA
AAGACTCCCG
CAGCTCATCG
CCTCAGCCTG (2)
CCTTCCCAGA
GACCAGTGGA (2)
GGAATGGACA (3)
GGAGGGCGGC
TAAGTCCTGA
TCAGCTCTGA
TTAGTCTGAC (2)
TTCTGTTCTG
50.60.0506
E12.5 retinaAAAAAAAGAA
CCTCAGCCTG (2)
CCTTCCCAGA
CCTTCCCAGG
GACCAGTGGA (2)
GGTACCCCTC
35.80.0358
E14.5 retinaCCTCAGCCTG (2)
CCTTCCAGGA (2)
CCTTCCCAGG
GACCAGTGGA (2)
GGTACCCCTC
GGTCCCCACA
TAAGTCCTGA
TCAGCTCTGA
21.60.0216
E16.5 retinaCCTCAGCCTG (2)
CCTTCCAGGA (2)
CCTTCCCAGA
CCTTCCCAGG
CCTTTCCAGG (4)
GCTCAGCCCT
GGTACCCCTC
GGTCCCCACA
21.70.0217
E18.5 retinaCCTCAGCCTG (2)
GACCAGTGGA (2)
GCCTTCCAGT
GGTACCCCTC
TAAGTCCTGA
21.80.0218
P0.5 retinaCCTCACCCTG (2)
CCTCAGCCTG (2)
GACCAGTGGA (2)
GGAGGGCGGC
21.70.0217
P2.5 retinaAAAAAAAGAA
CAGCTCATCG
CCTCAGCCTG (2)
CCTTTCCAGG (4)
GACCAGTGGA (2)
GACCCAGTGA
GCTCAGCCCT
GGTACCCCTC
TCAGCTCTGA
33.70.0337
P4.5 retinaCAGCTCATCG
CCTCAGCCTG (2)
GACCAGTGGA (2)
GCCTTCCAGT
GCTCAGCCCT
GGAGGGCGGC
GGTACCCCTC
TCAGCTCTGA
29.90.0299
P6.5 retinaCCTCAGCCTG (2)
CCTTTCCAGG (4)
GACCAGTGGA (2)
GGAGGGCGGC
GGTACCCCTC
GGTCCCCACA
40.10.0401
P10.5 crx- retinaCCTCAGCCTG (2)
CCTTCCCAGA
CCTTCCCAGG
GACCAGTGGA (2)
GGAGGGCGGC
GGTACCCCTC
TAAGTCCTGA
68.90.0689
P10.5 crx+ retinaCCTCAGCCTG (2)
CCTTCCAGGA (2)
CCTTCCCAGA
GACCAGTGGA (2)
GGAGGGCGGC
TCAGCTCTGA
53.80.0538
Adult retinalAAAAAAAGAA
CCTCACCCTG (2)
CCTCAGCCTG (2)
CCTTCCAGGA (2)
GACCAGTGGA (2)
GGTACCCCTC
TAAGTCCTGA
TCAGCTCTGA
TTCTGTTCTG
42.90.0429
ONLAAAAAAAGAA
CCTCAGCCTG (2)
GACCAGTGGA (2)
GGAATGGACA (3)
210.021