| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACTTCAGA GAACCTTTTT (2) TCCAGGTTAC TGTTTTTAAA (2)
| 9.7 | 0.0097 |
| Cb medulloblastoma | AAACTTCAGA TCAGGAACCA TGTTTTTAAA (2)
| 16.2 | 0.0162 |
| P8 GC+1d culture | AAACTTCAGA CTAGCTTCCT GACTTTCTGG (2) GTTTTTAAAA (2) TCCAGGTTAC TGTTTTTAAA (2)
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | AAACTTCAGA CTAGCTTCCT GAACCTTTTT (2) GACTTTCTGG (2) GTTTTTAAAA (2) TCCAGTTACA TGTTTTTAAA (2)
| 22.2 | 0.0222 |
| P1 cortex | AAACTTCAGA GAACCTTTTT (2) GTTTTTAAAA (2)
| 18.1 | 0.0181 |
| Hypothalamus | GTTTTTAAAA (2)
| 1.8 | 0.0018 |
| E12.5 retina | AAACTTCAGA GAACCTTTTT (2)
| 15 | 0.015 |
| E14.5 retina | AAACTTCAGA TCAGGAACCA
| 9.1 | 0.0091 |
| E16.5 retina | AAACTTCAGA GTTTTTAAAA (2)
| 5.4 | 0.0054 |
| E18.5 retina | AAACTTCAGA CTAGCTTCCT TCCAGGTTAC
| 5.4 | 0.0054 |
| P0.5 retina | AAACTTCAGA GAACCTTTTT (2) GTTTTTAAAA (2) TCCAGTTACA
| 17.7 | 0.0177 |
| P2.5 retina | AAACTTCAGA CTAGCTTCCT TCCAGTTAAA TCCAGTTACA TGTTTTTAAA (2)
| 17.8 | 0.0178 |
| P4.5 retina | AAACTTCAGA GTTTTTAAAA (2) TGTTTTTAAA (2)
| 17.8 | 0.0178 |
| P6.5 retina | AAACTTCAGA CTAGCTTCCT TGTTTTTAAA (2)
| 10 | 0.01 |
| P10.5 crx- retina | AAACTTCAGA CTAGCTTCCT
| 7.5 | 0.0075 |
| P10.5 crx+ retina | AAACTTCAGA CTAGCTTCCT GACTTTCTGG (2) TGTTTTTAAA (2)
| 13.3 | 0.0133 |
| Adult retinal | GACTTTCTGG (2) TCAGGAACCA
| 3.8 | 0.0038 |
| ONL | AAACTTCAGA TCCAGTTAAA TGTTTTTAAA (2)
| 11.4 | 0.0114 |