Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236553	Ctsb	cathepsin B	14	14 28.0 cM	13030
Gene Ontology	cathepsin B activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | mitochondrion | peroxidase activity | protein targeting | proteolysis and peptidolysis
Human Homolog	CTSB[cathepsin B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAGCTTTTG (2) AGGGTGCTTC CACTGGGAGA (2) CTAAATATCT (2) CTTGGATGGG GCAGGCTGGA (2) GTTTGCTGTG TAATCAAAAA TAGGTTGTTT 32.6 0.0326 Cb medulloblastoma AAAGCTTTTG (2) ACAATGTAGC (2) GTTTGCTGTG TAGCTTGTTT 43.8 0.0438 P8 GC+1d culture AAAGCTTTTG (2) AAGCTTTTGG ACAATGTAGC (2) AGGGTGCTTC CTAAATATCT (2) CTTGGATGGG GTTTGCTGTG TAGCTTGTTT 35.2 0.0352 P8 GC+SHH+1d culture AAAGCTTTTG (2) AAGCTTTTGG AGGGTGCTTC CACTGGGAGA (2) CTAAATATCT (2) CTTGGATGGG GTTTGCTGTG 36.4 0.0364 3T3 fibroblasts ACAATGTAGC (2) AGGGTGCTTC GTTTGCTGTG 10.5 0.0105 E15 cortex AAAGCTTTTG (2) AGGGTGCTTC GTTTGCTGTG 14.7 0.0147 P1 cortex CTTGGATGGG GTTTGCTGTG 13.6 0.0136 Hypothalamus AGGGTGCTTC CTTGGATGGG GGAGGCTGGA (2) GTTTGCTGTG TAGCTTGTTT 23.5 0.0235 E12.5 retina AAAGCTTTTG (2) AGGGTGCTTC CACTGGGAGA (2) GTTTGCTGTG 13.2 0.0132 E14.5 retina GCAGGCTGGA (2) GTTTGCTGTG TAGCTTGTTT TAGGTTGTTT 14.5 0.0145 E16.5 retina GAGACATCCT GCACTGGAGG GTTTGCTGTG TAGCTTGTTT 9 0.009 E18.5 retina AAAGCTTTTG (2) 1.8 0.0018 P0.5 retina AAAGCTTTTG (2) AGGGTGCTTC GAGACATCCT GGAGGCTGGA (2) GTTTGCTGTG 11.9 0.0119 P2.5 retina AGGGTGCTTC CTAAATATCT (2) GAGACATCCT GTTTGCTGTG TAATCAAAAA 10.7 0.0107 P4.5 retina AAAGCTTTTG (2) AGGGTGCTTC CTAAATATCT (2) GTTTGCTGTG TAATCAAAAA 17.9 0.0179 P6.5 retina ACAATGTAGC (2) AGGGTGCTTC GTTTGCTGTG 11.7 0.0117 P10.5 crx- retina AGGGTGCTTC GCACTGGAGG GTTTGCTGTG TAGCTTGTTT TAGGTTGTTT 22.5 0.0225 P10.5 crx+ retina AAAGCTTTTG (2) ACAATGTAGC (2) AGGGTGCTTC CTTGGATGGG GCACTGGAGG GTTTGCTGTG 28.7 0.0287 Adult retinal AAAGCTTTTG (2) ACAATGTAGC (2) AGGGTGCTTC CTAAATATCT (2) GAGACATCCT GTTTGCTGTG 22.4 0.0224 ONL ACAATGTAGC (2) AGGGTGCTTC GCACTGGAGG GCAGGCTGGA (2) GGAGGCTGGA (2) GTTTGCTGTG TAGCTTGTTT TAGGTTGTTT 36.2 0.0362