Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.240490 1200009K13RikRIKEN cDNA 1200009K13 gene 6    66870 
 Mm.240490 9330147J08RikRIKEN cDNA 9330147J08 gene 6    320467 
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 165 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAATACTTTTG (3)310.031
P8 Cb GCCTTAAGGATC (3)24.50.0245
P8 Cb GCCTCATTTCCT (2)4.90.0049
P8 Cb GCTAAGCCACCA (2)4.90.0049
P8 Cb GCAAGAATGCAT (2)3.30.0033
P8 Cb GCAGCCTCTTCA (2)3.30.0033
P8 Cb GCTGTGAAAATG (2)3.30.0033
P8 Cb GCCAAAAGCTTT (2)1.60.0016
P8 Cb GCCTGAAGATTC (3)1.60.0016
P8 Cb GCCTTCAGGCCA (2)1.60.0016
P8 Cb GCTAAACTTCTG (2)1.60.0016
P8 Cb GCTTCAGATCCC (3)1.60.0016
Cb medulloblastomaCTTAAGGATC (3)6.90.0069
Cb medulloblastomaAATACTTTTG (3)4.60.0046
Cb medulloblastomaCTCATTTCCT (2)4.60.0046
Cb medulloblastomaAGTGCTGGGA (2)2.30.0023
Cb medulloblastomaCAAAAGCTTT (2)2.30.0023
Cb medulloblastomaCCTGGGCACC (3)2.30.0023
Cb medulloblastomaTAAACTTCTG (2)2.30.0023
Cb medulloblastomaTAAGCCACCA (2)2.30.0023
Cb medulloblastomaTGTCCAGGAC (3)2.30.0023
P8 GC+1d cultureCTTAAGGATC (3)11.40.0114
P8 GC+1d cultureAATACTTTTG (3)9.10.0091
P8 GC+1d cultureCCTGGGCACC (3)3.40.0034
P8 GC+1d cultureAAAATAAATT (3)2.30.0023
P8 GC+1d cultureCAAAAGCTTT (2)2.30.0023
P8 GC+1d cultureAAGAATGCAT (2)1.10.0011
P8 GC+1d cultureCTGAAGATTC (3)1.10.0011
P8 GC+1d cultureTAAACTTCTG (2)1.10.0011
P8 GC+1d cultureTGTCCAGGAC (3)1.10.0011
P8 GC+SHH+1d cultureCTTAAGGATC (3)16.40.0164
P8 GC+SHH+1d cultureAATACTTTTG (3)9.40.0094
P8 GC+SHH+1d cultureCCTGGGCACC (3)4.70.0047
P8 GC+SHH+1d cultureTAAGCCACCA (2)3.50.0035
P8 GC+SHH+1d cultureCAAAAGCTTT (2)2.30.0023
P8 GC+SHH+1d cultureTGTCCAGGAC (3)2.30.0023
P8 GC+SHH+1d cultureAAAATAAATT (3)1.20.0012
P8 GC+SHH+1d cultureAGCGACAAAC (2)1.20.0012
P8 GC+SHH+1d cultureCTCATTTCCT (2)1.20.0012
P8 GC+SHH+1d cultureCTGAAGATTC (3)1.20.0012
P8 GC+SHH+1d cultureCTTCAGGCCA (2)1.20.0012
P8 GC+SHH+1d cultureTAAACTTCTG (2)1.20.0012
3T3 fibroblastsCCTGGGCACC (3)17.50.0175
3T3 fibroblastsAGCCTCTTCA (2)3.50.0035
3T3 fibroblastsCTTAAGGATC (3)3.50.0035
3T3 fibroblastsCTTCAGGCCA (2)3.50.0035
E15 cortexCCTGGGCACC (3)14.80.0148
E15 cortexCTTAAGGATC (3)9.90.0099
E15 cortexCTCATTTCCT (2)4.90.0049
E15 cortexCTGAAGATTC (3)4.90.0049
P1 cortexCTGAAGATTC (3)18.20.0182
P1 cortexAATACTTTTG (3)9.10.0091
P1 cortexCTTAAGGATC (3)9.10.0091
P1 cortexCTCATTTCCT (2)4.50.0045
HypothalamusCTTAAGGATC (3)12.70.0127
HypothalamusTGCTAGGAAT (2)5.40.0054
HypothalamusAATACTTTTG (3)3.60.0036
HypothalamusAAAATAAATT (3)1.80.0018
HypothalamusCCTGGGCACC (3)1.80.0018
HypothalamusCTTCAGGCCA (2)1.80.0018
HypothalamusCTTTGTAATC (2)1.80.0018
E12.5 retinaCTTAAGGATC (3)37.50.0375
E12.5 retinaAATACTTTTG (3)18.80.0188
E12.5 retinaCCTGGGCACC (3)5.60.0056
E12.5 retinaAAGAATGCAT (2)3.80.0038
E12.5 retinaCTTTGTAATC (2)3.80.0038
E12.5 retinaTAAACTTCTG (2)3.80.0038
E12.5 retinaAGCGACAAAC (2)1.90.0019
E12.5 retinaCAAAAGCTTT (2)1.90.0019
E12.5 retinaTAAGCCACCA (2)1.90.0019
E12.5 retinaTTAACTAAAG (2)1.90.0019
E14.5 retinaAATACTTTTG (3)27.30.0273
E14.5 retinaCTTAAGGATC (3)200.02
E14.5 retinaCAAAAGCTTT (2)5.50.0055
E14.5 retinaAGCCTCTTCA (2)3.60.0036
E14.5 retinaCTTCAGGCCA (2)3.60.0036
E14.5 retinaTTAACTAAAG (2)3.60.0036
E14.5 retinaAAGAATGCAT (2)1.80.0018
E14.5 retinaAGCGACAAAC (2)1.80.0018
E14.5 retinaAGTGCTGGGA (2)1.80.0018
E14.5 retinaCCTGGGCACC (3)1.80.0018
E14.5 retinaCTCATTTCCT (2)1.80.0018
E14.5 retinaTAAACTTCTG (2)1.80.0018
E14.5 retinaTAAGCCACCA (2)1.80.0018
E16.5 retinaCTTAAGGATC (3)290.029
E16.5 retinaAATACTTTTG (3)18.10.0181
E16.5 retinaCAAAAGCTTT (2)12.70.0127
E16.5 retinaCCTGGGCACC (3)9.10.0091
E16.5 retinaCTGAAGATTC (3)9.10.0091
E16.5 retinaAGCCTCTTCA (2)5.40.0054
E16.5 retinaAAAATAAATT (3)3.60.0036
E16.5 retinaCTCATTTCCT (2)3.60.0036
E16.5 retinaCTTCAGGCCA (2)3.60.0036
E16.5 retinaTAAACTTCTG (2)1.80.0018
E16.5 retinaTAAGCCACCA (2)1.80.0018
E18.5 retinaCTTAAGGATC (3)32.70.0327
E18.5 retinaAATACTTTTG (3)14.60.0146
E18.5 retinaCAAAAGCTTT (2)3.60.0036
E18.5 retinaCCTGGGCACC (3)3.60.0036
E18.5 retinaCTCATTTCCT (2)3.60.0036
E18.5 retinaTAAGCCACCA (2)3.60.0036
E18.5 retinaAGCCTCTTCA (2)1.80.0018
E18.5 retinaTGTCCAGGAC (3)1.80.0018
P0.5 retinaCTTAAGGATC (3)19.60.0196
P0.5 retinaAATACTTTTG (3)13.70.0137
P0.5 retinaCAAAAGCTTT (2)3.90.0039
P0.5 retinaAAAATAAATT (3)20.002
P0.5 retinaAAGACAAACG (2)20.002
P0.5 retinaAGCGACAAAC (2)20.002
P0.5 retinaCCTGGGCACC (3)20.002
P0.5 retinaTAAGCCACCA (2)20.002
P0.5 retinaTTCAGATCCC (3)20.002
P2.5 retinaCTTAAGGATC (3)17.60.0176
P2.5 retinaAATACTTTTG (3)70.007
P2.5 retinaCCTGGGCACC (3)70.007
P2.5 retinaCTTCAGGCCA (2)3.50.0035
P2.5 retinaTGTCCAGGAC (3)3.50.0035
P2.5 retinaAGCCTCTTCA (2)1.80.0018
P2.5 retinaCAAAAGCTTT (2)1.80.0018
P2.5 retinaCTCATTTCCT (2)1.80.0018
P4.5 retinaAATACTTTTG (3)11.90.0119
P4.5 retinaCTTAAGGATC (3)11.90.0119
P4.5 retinaCCTGGGCACC (3)9.90.0099
P4.5 retinaAAGAATGCAT (2)20.002
P4.5 retinaCTGAAGATTC (3)20.002
P4.5 retinaTGTGAAAATG (2)20.002
P6.5 retinaCTTAAGGATC (3)11.70.0117
P6.5 retinaAATACTTTTG (3)8.30.0083
P6.5 retinaCAAAAGCTTT (2)8.30.0083
P6.5 retinaCCTGGGCACC (3)3.30.0033
P6.5 retinaAAGACAAACG (2)1.70.0017
P6.5 retinaAGCCTCTTCA (2)1.70.0017
P6.5 retinaCTCATTTCCT (2)1.70.0017
P6.5 retinaCTGAAGATTC (3)1.70.0017
P6.5 retinaTAAGCCACCA (2)1.70.0017
P6.5 retinaTGTGAAAATG (2)1.70.0017
P10.5 crx- retinaAATACTTTTG (3)9.30.0093
P10.5 crx- retinaCTCATTTCCT (2)5.60.0056
P10.5 crx- retinaCTTAAGGATC (3)5.60.0056
P10.5 crx- retinaTTAACTAAAG (2)3.70.0037
P10.5 crx- retinaAAGACAAACG (2)1.90.0019
P10.5 crx- retinaCAAAAGCTTT (2)1.90.0019
P10.5 crx- retinaCCTGGGCACC (3)1.90.0019
P10.5 crx- retinaCTTCAGGCCA (2)1.90.0019
P10.5 crx- retinaCTTTGTAATC (2)1.90.0019
P10.5 crx- retinaTAAACTTCTG (2)1.90.0019
P10.5 crx- retinaTAAGCCACCA (2)1.90.0019
P10.5 crx+ retinaCTTAAGGATC (3)13.50.0135
P10.5 crx+ retinaAATACTTTTG (3)5.80.0058
P10.5 crx+ retinaAAGAATGCAT (2)1.90.0019
P10.5 crx+ retinaAAGACAAACG (2)1.90.0019
P10.5 crx+ retinaCTTTGTAATC (2)1.90.0019
P10.5 crx+ retinaTAAGCCACCA (2)1.90.0019
Adult retinalCTTAAGGATC (3)7.40.0074
Adult retinalCCTGGGCACC (3)3.70.0037
Adult retinalTTCAGATCCC (3)3.70.0037
Adult retinalAATACTTTTG (3)1.90.0019
Adult retinalAGTGCTGGGA (2)1.90.0019
Adult retinalCTCATTTCCT (2)1.90.0019
Adult retinalCTGAAGATTC (3)1.90.0019
Adult retinalCTTTGTAATC (2)1.90.0019
ONLAATACTTTTG (3)3.80.0038
ONLCTTAAGGATC (3)3.80.0038
ONLTGTGAAAATG (2)1.90.0019
ONLTTAACTAAAG (2)1.90.0019