Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.242646	Usp9x	ubiquitin specific protease 9, X chromosome	X	X 5.5 cM	22284
Gene Ontology	cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | peptidase activity | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP9X[ubiquitin specific protease 9, X-linked (fat facets-like, Drosophila)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGGAGAG TTGATGCAGG (3) 3.2 0.0032 Cb medulloblastoma TTGATGCAGG (3) 2.3 0.0023 P8 GC+1d culture GAGTGGAGAG TTCAGCATCG TTTGACAGTG (2) 6.8 0.0068 P8 GC+SHH+1d culture GAGTGGAGAG TTCAGCATCG TTTGACAGTG (2) 8.1 0.0081 3T3 fibroblasts GAGTGGAGAG TTCAGCATCG TTGATGCAGG (3) 14 0.014 P1 cortex TCACACCAAT TTTGACAGTG (2) 13.6 0.0136 Hypothalamus GAGTGGAGAG TTCAGCATCG TTTGACAGTG (2) 9 0.009 E12.5 retina GAGTGGAGAG TTTGACAGTG (2) 3.8 0.0038 E14.5 retina TTTGACAGTG (2) 1.8 0.0018 E16.5 retina GAGTGGAGAG TTCAGCATCG TTGATGCAGG (3) TTTGACAGTG (2) 9 0.009 E18.5 retina TTCAGCATCG 3.6 0.0036 P0.5 retina GAGTGGAGAG TTTGACAGTG (2) 9.8 0.0098 P2.5 retina AGTGTTGCAT 1.8 0.0018 P4.5 retina GAGTGGAGAG TTCAGCATCG 4 0.004 P6.5 retina GAGTGGAGAG TTTGACAGTG (2) 3.4 0.0034 P10.5 crx- retina AGTGTTGCAT GAGTGGAGAG TCACACCAAT TTCAGCATCG TTTGACAGTG (2) 14.9 0.0149 P10.5 crx+ retina TTCAGCATCG TTTGACAGTG (2) 5.7 0.0057 Adult retinal AAAATAGAAA AGTGTTGCAT TTTGACAGTG (2) 5.7 0.0057 ONL AAAATAGAAA TCACACCAAT TTTGACAGTG (2) 9.5 0.0095