Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245746	Rdx	radixin	9		19684
Gene Ontology	actin binding | apical protein localization | cytoplasm | cytoskeletal protein binding | cytoskeleton | membrane | microvillus | microvillus biogenesis | protein binding | structural molecule activity
Human Homolog	RDX[radixin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 183 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTAAAAA GAAAACAAAA GTGGCGCACG TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 53.8 0.0538 Cb medulloblastoma ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTGGCGCACG TCAGGTCATT (3) TTCATAAATA (3) TTGTGGTGAC (2) TTTTTTTTTT (2) 64.6 0.0646 P8 GC+1d culture AAACATCCCA ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTCTCTGAAA (2) GTGGCGCACG TCAGGTCATT (3) TCTGTCTGTC (3) TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 67 0.067 P8 GC+SHH+1d culture AAACATCCCA ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTGGCGCACG TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 74.9 0.0749 3T3 fibroblasts CGAAGGAGAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG 80.6 0.0806 E15 cortex CGAAGGAGAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG TCAGGTCATT (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 148.1 0.1481 P1 cortex ATGTTAAAAA GTGGCGCACG TTCATAAATA (3) TTGTGGTGAC (2) TTTTTTTTTT (2) 36.2 0.0362 Hypothalamus ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTCTCTGAAA (2) GTGGCGCACG TCAGGTCATT (3) TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 41.5 0.0415 E12.5 retina AAACATCCCA ATGTTAAAAA GTCTCTGAAA (2) GTGGCGCACG TACAGTTCAA TCAGGTCATT (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 49 0.049 E14.5 retina ATGTTAAAAA GAAAACAAAA GTGGCGCACG TCAGGTCATT (3) TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTGGTCATT TTTTTTTTTT (2) 93 0.093 E16.5 retina ATGTTAAAAA GAAAACAAAA GTCTCTGAAA (2) GTGGCGCACG TCAGGTCATT (3) TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 79.7 0.0797 E18.5 retina ATGTTAAAAA GAAAACAAAA GTGGCGCACG TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 110.9 0.1109 P0.5 retina ATGTTAAAAA CGAAGGAGAA GAAAACAAAA GTCATAGCTG (2) GTCTCTGAAA (2) GTGGCGCACG TCAGGTCATT (3) TCTGTCTGTC (3) TGCTCTCAAC TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 92.4 0.0924 P2.5 retina ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG TCAGGTCATT (3) TCTGTCTGTC (3) TTGTGGTGAC (2) TTTTTTTTTT (2) 89.8 0.0898 P4.5 retina ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTGGTCATT TTTTTTTTTT (2) 105 0.105 P6.5 retina AAACATCCCA ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG TCTGTCTGTC (3) TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTGGTCATT TTTTTTTTTT (2) 100 0.1 P10.5 crx- retina GAAAACAAAA GTCTCTGAAA (2) GTGGCGCACG TCAGGTCATT (3) TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) 35.4 0.0354 P10.5 crx+ retina ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTGGCGCACG TCTGTCTGTC (3) TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 96 0.096 Adult retinal ATGTTAAAAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG TCAGGTCATT (3) TCTGTCTGTC (3) TTCATAAATA (3) TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 57.6 0.0576 ONL ATGTTAAAAA GAAAACAAAA GGGGGGGGGG GTCATAGCTG (2) GTGGCGCACG TACAGTTCAA TGCTCTCAAC TTCATATAGC TTGTGGTGAC (2) TTTTTTTTTT (2) 61.1 0.0611