Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246377	Tubb2	tubulin, beta 2	13	13 16.0 cM	22151
Gene Ontology	GTP binding | microtubule | microtubule-based process | structural constituent of cytoskeleton
Human Homolog	TUBB[tubulin, beta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAGGTGG (2) AGTGGAGGGA (2) CCCTCACCCA (2) GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT 45.7 0.0457 Cb medulloblastoma AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) TGTATAAAAA (3) TGTATAAAAT 62.4 0.0624 P8 GC+1d culture AAGGAGGTGG (2) AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) TGTATAAAAA (3) TGTATAAAAT 62.7 0.0627 P8 GC+SHH+1d culture AGTGGAGGGA (2) CCCTCACCCA (2) GCAGTGAACT TGTATAAAAA (3) TGTATAAAAT 94.9 0.0949 3T3 fibroblasts AGTGGAGGGA (2) GTGGCCATTT 24.5 0.0245 E15 cortex CCCTCACCCA (2) TGTATAAAAA (3) 19.8 0.0198 P1 cortex AAGGAGGTGG (2) AGTGGAGGGA (2) CCCTCACCCA (2) TGTATAAAAA (3) TGTATAAAAT 177.1 0.1771 Hypothalamus AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) GCAGTGAACT GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT TGTTTAAAAA (2) 105 0.105 E12.5 retina AGTGGAGGGA (2) TGTATAAAAA (3) 31.9 0.0319 E14.5 retina AAGGAGGTGG (2) AGTGGAGGGA (2) AGTGGAGTGA (2) CCCTCACCCA (2) CTGGAGGACA (3) TGTATAAAAA (3) TGTATAAAAT 67.2 0.0672 E16.5 retina AAGGAGGTGG (2) AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) TGTATAAAAA (3) TGTATAAAAT 96 0.096 E18.5 retina AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) TGTATAAAAA (3) TGTATAAAAT 129.1 0.1291 P0.5 retina AAGGAGGTGG (2) AGTGGAGGGA (2) CCCTCACCCA (2) GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT 57 0.057 P2.5 retina CTGGAGGACA (3) TGTATAAAAA (3) TGTATAAAAT 47.5 0.0475 P4.5 retina AGTGGAGTGA (2) TGTATAAAAA (3) TGTATAAAAT TGTTTAAAAA (2) 83.2 0.0832 P6.5 retina AGTGGAGGGA (2) TGTATAAAAA (3) TGTATAAAAT TGTTTAAAAA (2) 90 0.09 P10.5 crx- retina AGTGGAGGGA (2) AGTGGAGTGA (2) CTGGAGGACA (3) GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT 55.8 0.0558 P10.5 crx+ retina AGTGGAGGGA (2) TGTATAAAAA (3) TGTATAAAAT 69.1 0.0691 Adult retinal AGTGGAGGGA (2) GTGGCCATTT TGTATAAAAA (3) 31.6 0.0316 ONL AAGGAGGTGG (2) AGTGGAGGGA (2) GCAGTGAACT TGTATAAAAA (3) 34.4 0.0344