Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.247473
Sdcbp
syndecan binding protein
4
53378
Mm.247473
AU015268
expressed sequence AU015268
4
100268
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 145 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GACTGGTTCC
(
6
)
11.4
0.0114
P8 Cb GC
TAAAAGTTGT
(
5
)
6.5
0.0065
P8 Cb GC
GAGACCTTCT (
6
)
4.9
0.0049
P8 Cb GC
TAAAAGTTCT
(
3
)
4.9
0.0049
P8 Cb GC
TGCTTCAATT
(
4
)
4.9
0.0049
P8 Cb GC
GTCTCTGCAG (
6
)
1.6
0.0016
P8 Cb GC
TCGAAAAAAA (
3
)
1.6
0.0016
P8 Cb GC
TTTATTGCAG (
5
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TAAAAGTTGT
(
5
)
9.2
0.0092
Cb medulloblastoma
CTTCAGAAAA
(
7
)
2.3
0.0023
Cb medulloblastoma
GAGACCTTCT (
6
)
2.3
0.0023
Cb medulloblastoma
TGCTTCAATT
(
4
)
2.3
0.0023
Cb medulloblastoma
TTTATTGCAG (
5
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TAAAAGTTGT
(
5
)
9.1
0.0091
P8 GC+1d culture
TGCTTCAATT
(
4
)
8
0.008
P8 GC+1d culture
GCCTACTTAA (
4
)
2.3
0.0023
P8 GC+1d culture
GACTGGTTCC
(
6
)
1.1
0.0011
P8 GC+1d culture
GAGACCTTCT (
6
)
1.1
0.0011
P8 GC+1d culture
TTTGGCTTTA (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TAAAAGTTGT
(
5
)
10.5
0.0105
P8 GC+SHH+1d culture
TGCTTCAATT
(
4
)
10.5
0.0105
P8 GC+SHH+1d culture
TTTGGCTTTA (
7
)
3.5
0.0035
P8 GC+SHH+1d culture
CCATTCATCA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GACTGGTTCC
(
6
)
2.3
0.0023
P8 GC+SHH+1d culture
GAGACCTTCT (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCTACTTAA (
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TCGAAAAAAA (
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GCCTACTTAA (
4
)
3.5
0.0035
3T3 fibroblasts
GCTGAAAGAG (
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CTTCAGAAAA
(
7
)
4.9
0.0049
E15 cortex
TAAAAGTTCT
(
3
)
4.9
0.0049
E15 cortex
TGCTTCAATT
(
4
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
AAATATATGT (
2
)
4.5
0.0045
P1 cortex
GAGAACCTTT (
7
)
4.5
0.0045
P1 cortex
GCCTACTTAA (
4
)
4.5
0.0045
P1 cortex
TAAAGTGTTT (
3
)
4.5
0.0045
P1 cortex
TGCTTCAATT
(
4
)
4.5
0.0045
P1 cortex
TTTATTGCAG (
5
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TAAAAGTTGT
(
5
)
9.1
0.0091
Hypothalamus
GAGAACCTTT (
7
)
7.2
0.0072
Hypothalamus
TGCTTCAATT
(
4
)
7.2
0.0072
Hypothalamus
AAATATATGT (
2
)
1.8
0.0018
Hypothalamus
GCCTACTTAA (
4
)
1.8
0.0018
Hypothalamus
GTCTCTGCAG (
6
)
1.8
0.0018
Hypothalamus
TAAAGTGTTT (
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TAAAAGTTGT
(
5
)
11.3
0.0113
E12.5 retina
TGCTTCAATT
(
4
)
9.4
0.0094
E12.5 retina
AAATATATGT (
2
)
7.5
0.0075
E12.5 retina
GACTGGTTCC
(
6
)
1.9
0.0019
E12.5 retina
TAAAGTGTTT (
3
)
1.9
0.0019
E12.5 retina
TTTGGCTTTA (
7
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGCTTCAATT
(
4
)
5.5
0.0055
E14.5 retina
GAGACCTTCT (
6
)
3.6
0.0036
E14.5 retina
TAAAAGTTGT
(
5
)
3.6
0.0036
E14.5 retina
CCATTCATCA (
3
)
1.8
0.0018
E14.5 retina
GACTGGTTCC
(
6
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TAAAAGTTGT
(
5
)
10.9
0.0109
E16.5 retina
GACTGGTTCC
(
6
)
9.1
0.0091
E16.5 retina
TGCTTCAATT
(
4
)
9.1
0.0091
E16.5 retina
CCATTCATCA (
3
)
3.6
0.0036
E16.5 retina
TAAAAGTTCT
(
3
)
3.6
0.0036
E16.5 retina
TAAAGTGTTT (
3
)
3.6
0.0036
E16.5 retina
GAGAACCTTT (
7
)
1.8
0.0018
E16.5 retina
GTCTCTGCAG (
6
)
1.8
0.0018
E16.5 retina
TCGAAAAAAA (
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGCTTCAATT
(
4
)
20
0.02
E18.5 retina
TAAAAGTTCT
(
3
)
7.3
0.0073
E18.5 retina
TAAAAGTTGT
(
5
)
5.5
0.0055
E18.5 retina
GACTGGTTCC
(
6
)
3.6
0.0036
E18.5 retina
GAGAACCTTT (
7
)
1.8
0.0018
E18.5 retina
TCGAAAAAAA (
3
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GACTGGTTCC
(
6
)
7.9
0.0079
P0.5 retina
GAGACCTTCT (
6
)
5.9
0.0059
P0.5 retina
TGCTTCAATT
(
4
)
5.9
0.0059
P0.5 retina
CCATTCATCA (
3
)
2
0.002
P0.5 retina
CTTCAGAAAA
(
7
)
2
0.002
P0.5 retina
GCCTACTTAA (
4
)
2
0.002
P0.5 retina
TAAAAGTTCT
(
3
)
2
0.002
P0.5 retina
TAAAGTGTTT (
3
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TGCTTCAATT
(
4
)
22.9
0.0229
P2.5 retina
GACTGGTTCC
(
6
)
7
0.007
P2.5 retina
TAAAAGTTGT
(
5
)
5.3
0.0053
P2.5 retina
CTTCAGAAAA
(
7
)
3.5
0.0035
P2.5 retina
GAGAACCTTT (
7
)
1.8
0.0018
P2.5 retina
GCCTACTTAA (
4
)
1.8
0.0018
P2.5 retina
GCTGAAAGAG (
6
)
1.8
0.0018
P2.5 retina
TCGAAAAAAA (
3
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGCTTCAATT
(
4
)
11.9
0.0119
P4.5 retina
GACTGGTTCC
(
6
)
5.9
0.0059
P4.5 retina
GCTGAAAGAG (
6
)
4
0.004
P4.5 retina
TAAAAGTTGT
(
5
)
4
0.004
P4.5 retina
GAGAACCTTT (
7
)
2
0.002
P4.5 retina
TAAAAGTTCT
(
3
)
2
0.002
P4.5 retina
TCGAAAAAAA (
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGCTTCAATT
(
4
)
10
0.01
P6.5 retina
TAAAAGTTCT
(
3
)
8.3
0.0083
P6.5 retina
GAGACCTTCT (
6
)
3.3
0.0033
P6.5 retina
TAAAAGTTGT
(
5
)
3.3
0.0033
P6.5 retina
AAATATATGT (
2
)
1.7
0.0017
P6.5 retina
GACTGGTTCC
(
6
)
1.7
0.0017
P6.5 retina
TTTGGCTTTA (
7
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GACTGGTTCC
(
6
)
11.1
0.0111
P10.5 crx- retina
TAAAAGTTGT
(
5
)
9.3
0.0093
P10.5 crx- retina
CTTCAGAAAA
(
7
)
3.7
0.0037
P10.5 crx- retina
AAATATATGT (
2
)
1.9
0.0019
P10.5 crx- retina
GAGAACCTTT (
7
)
1.9
0.0019
P10.5 crx- retina
GCCTACTTAA (
4
)
1.9
0.0019
P10.5 crx- retina
TAAAGTGTTT (
3
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGCTTCAATT
(
4
)
9.6
0.0096
P10.5 crx+ retina
GACTGGTTCC
(
6
)
3.8
0.0038
P10.5 crx+ retina
AAATATATGT (
2
)
1.9
0.0019
P10.5 crx+ retina
CTTCAGAAAA
(
7
)
1.9
0.0019
P10.5 crx+ retina
GAGACCTTCT (
6
)
1.9
0.0019
P10.5 crx+ retina
TAAAAGTTCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAAAAGTTGT
(
5
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TAAAAGTTCT
(
3
)
3.7
0.0037
Adult retinal
TGCTTCAATT
(
4
)
3.7
0.0037
Adult retinal
GACTGGTTCC
(
6
)
1.9
0.0019
Adult retinal
TAAAAGTTGT
(
5
)
1.9
0.0019
Adult retinal
TTTGGCTTTA (
7
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TGCTTCAATT
(
4
)
9.6
0.0096
ONL
TTTATTGCAG (
5
)
3.8
0.0038
ONL
GAGAACCTTT (
7
)
1.9
0.0019
ONL
GCCTACTTAA (
4
)
1.9
0.0019
ONL
TAAAAGTTCT
(
3
)
1.9
0.0019