Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.247473
Sdcbp
syndecan binding protein
4
53378
Mm.247473
AU015268
expressed sequence AU015268
4
100268
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACTGGTTCC
(
3
)
11.4
0.0114
P8 Cb GC
TAAAAGTTGT
(
3
)
6.5
0.0065
P8 Cb GC
TAAAAGTTCT
(
3
)
4.9
0.0049
P8 Cb GC
TGCTTCAATT
(
3
)
4.9
0.0049
Cb medulloblastoma
TAAAAGTTGT
(
3
)
9.2
0.0092
Cb medulloblastoma
CTTCAGAAAA
(
4
)
2.3
0.0023
Cb medulloblastoma
TGCTTCAATT
(
3
)
2.3
0.0023
P8 GC+1d culture
TAAAAGTTGT
(
3
)
9.1
0.0091
P8 GC+1d culture
TGCTTCAATT
(
3
)
8
0.008
P8 GC+1d culture
GACTGGTTCC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TAAAAGTTGT
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
TGCTTCAATT
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
GACTGGTTCC
(
3
)
2.3
0.0023
E15 cortex
CTTCAGAAAA
(
4
)
4.9
0.0049
E15 cortex
TAAAAGTTCT
(
3
)
4.9
0.0049
E15 cortex
TGCTTCAATT
(
3
)
4.9
0.0049
P1 cortex
TGCTTCAATT
(
3
)
4.5
0.0045
Hypothalamus
TAAAAGTTGT
(
3
)
9.1
0.0091
Hypothalamus
TGCTTCAATT
(
3
)
7.2
0.0072
E12.5 retina
TAAAAGTTGT
(
3
)
11.3
0.0113
E12.5 retina
TGCTTCAATT
(
3
)
9.4
0.0094
E12.5 retina
GACTGGTTCC
(
3
)
1.9
0.0019
E14.5 retina
TGCTTCAATT
(
3
)
5.5
0.0055
E14.5 retina
TAAAAGTTGT
(
3
)
3.6
0.0036
E14.5 retina
GACTGGTTCC
(
3
)
1.8
0.0018
E16.5 retina
TAAAAGTTGT
(
3
)
10.9
0.0109
E16.5 retina
GACTGGTTCC
(
3
)
9.1
0.0091
E16.5 retina
TGCTTCAATT
(
3
)
9.1
0.0091
E16.5 retina
TAAAAGTTCT
(
3
)
3.6
0.0036
E18.5 retina
TGCTTCAATT
(
3
)
20
0.02
E18.5 retina
TAAAAGTTCT
(
3
)
7.3
0.0073
E18.5 retina
TAAAAGTTGT
(
3
)
5.5
0.0055
E18.5 retina
GACTGGTTCC
(
3
)
3.6
0.0036
P0.5 retina
GACTGGTTCC
(
3
)
7.9
0.0079
P0.5 retina
TGCTTCAATT
(
3
)
5.9
0.0059
P0.5 retina
CTTCAGAAAA
(
4
)
2
0.002
P0.5 retina
TAAAAGTTCT
(
3
)
2
0.002
P2.5 retina
TGCTTCAATT
(
3
)
22.9
0.0229
P2.5 retina
GACTGGTTCC
(
3
)
7
0.007
P2.5 retina
TAAAAGTTGT
(
3
)
5.3
0.0053
P2.5 retina
CTTCAGAAAA
(
4
)
3.5
0.0035
P4.5 retina
TGCTTCAATT
(
3
)
11.9
0.0119
P4.5 retina
GACTGGTTCC
(
3
)
5.9
0.0059
P4.5 retina
TAAAAGTTGT
(
3
)
4
0.004
P4.5 retina
TAAAAGTTCT
(
3
)
2
0.002
P6.5 retina
TGCTTCAATT
(
3
)
10
0.01
P6.5 retina
TAAAAGTTCT
(
3
)
8.3
0.0083
P6.5 retina
TAAAAGTTGT
(
3
)
3.3
0.0033
P6.5 retina
GACTGGTTCC
(
3
)
1.7
0.0017
P10.5 crx- retina
GACTGGTTCC
(
3
)
11.1
0.0111
P10.5 crx- retina
TAAAAGTTGT
(
3
)
9.3
0.0093
P10.5 crx- retina
CTTCAGAAAA
(
4
)
3.7
0.0037
P10.5 crx+ retina
TGCTTCAATT
(
3
)
9.6
0.0096
P10.5 crx+ retina
GACTGGTTCC
(
3
)
3.8
0.0038
P10.5 crx+ retina
CTTCAGAAAA
(
4
)
1.9
0.0019
P10.5 crx+ retina
TAAAAGTTCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAAAAGTTGT
(
3
)
1.9
0.0019
Adult retinal
TAAAAGTTCT
(
3
)
3.7
0.0037
Adult retinal
TGCTTCAATT
(
3
)
3.7
0.0037
Adult retinal
GACTGGTTCC
(
3
)
1.9
0.0019
Adult retinal
TAAAAGTTGT
(
3
)
1.9
0.0019
ONL
TGCTTCAATT
(
3
)
9.6
0.0096
ONL
TAAAAGTTCT
(
3
)
1.9
0.0019
