Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248827	AI316784	expressed sequence AI316784	11		103672
Mm.248827	Canx	calnexin	11	11 30.0 cM	12330
Gene Ontology	calcium ion binding | calcium ion storage activity | endoplasmic reticulum | extracellular space | integral to membrane | integral to membrane | protein folding | sugar binding
Human Homolog	CANX[calnexin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 207 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAAAACAAAA (2) AAGCAACTAA (2) AGGAAAACAG (2) CTGTGTGTCA (3) GACATTTTAC (2) GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT 264.2 0.2642 Cb medulloblastoma AAAAAAAAAA (2) AAAAACAAAA (2) AGGAAAACAG (2) CAGATCTGAA CTGTGTGTCA (3) GGTAGAACTG TAACAGTTGT (2) TGTCTGTCCT (4) 878.7 0.8787 P8 GC+1d culture AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) ACTCCTCCCT AGGAAAACAG (2) CAGATCTGAA CCAGTAGTAC (2) CTGTGTGTCA (3) GACATTTTAC (2) GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT TTTCTTCTTT (6) TTTTTTTCCC (3) 310.3 0.3103 P8 GC+SHH+1d culture AAAAAAAAAA (2) AAAAAACAAA (4) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) ACTCCTCCCT AGGAAAACAG (2) CAGATCTGAA CCAGTAGTAC (2) CTGTGTGTCA (3) GACATTTTAC (2) TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT TTTCTTCTTT (6) TTTCTTTTTT 402.6 0.4026 3T3 fibroblasts AAAAAAAAAA (2) AAGCAACTAA (2) CTGTGTGTCA (3) GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) 80.5 0.0805 E15 cortex AAAAAAAAAA (2) AAAAACAAAA (2) CAGATCTGAA TGTGTGAGGT 252.3 0.2523 P1 cortex AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) CAGATCTGAA TAACAGTTGT (2) TGTGTGAGGT 281.6 0.2816 Hypothalamus AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) ACTCCTCCCT CAGATCTGAA TAACAGTTGT (2) TGTGTGAGGT TTTCTTCTTT (6) 164.8 0.1648 E12.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) CAGATCTGAA GACATTTTAC (2) TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT TTTCTTCTTT (6) TTTTTTTCCC (3) 247.9 0.2479 E14.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) CTGTGTGTCA (3) GACATTTTAC (2) GGTAGAACTG TAACAGTTGT (2) TGTCTGTCCT (4) TGTGTGAGGT TTTTTTTCCC (3) 131 0.131 E16.5 retina AAAAAAAAAA (2) GACATTTTAC (2) TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT TTTCTTCTTT (6) 86.9 0.0869 E18.5 retina AAAAAAAAAA (2) AAAAAACAAA (4) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) ACTCCTCCCT CAGATCTGAA TAACAGTTGT (2) TGTCTGTCCT (4) TGTGTGAGGT TTTCTTTTTT TTTTTTTCCC (3) 449.1 0.4491 P0.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) ACTCCTCCCT AGGAAAACAG (2) CCAGTAGTAC (2) TAACAGTTGT (2) TGGAATGCAG (2) TGTGTGAGGT TTTTTTTCCC (3) 180.7 0.1807 P2.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) AGGAAAACAG (2) CAGATCTGAA CTAAGAGGCC (2) GACATTTTAC (2) GGCCTGGGGG GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTGTGAGGT 396.2 0.3962 P4.5 retina AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) AGGAAAACAG (2) GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTGTGAGGT 342.9 0.3429 P6.5 retina AAAAAAAAAA (2) AAAAAACAAA (4) AAGCAACTAA (2) ACTCCTCCCT CAGATCTGAA CTAAGAGGCC (2) GGCCTGGGGG GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTGTGAGGT TTTTTTTCCC (3) 330.3 0.3303 P10.5 crx- retina AAAAAAAAAA (2) AAAAACAAAA (2) AACAAATGAA (2) ACTCCTCCCT CAGATCTGAA CCAGTAGTAC (2) GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT TTTTTTTCCC (3) 132.1 0.1321 P10.5 crx+ retina AAAAAAAAAA (2) AAGCAACTAA (2) ACTCCTCCCT CTGTGTGTCA (3) GGTAGAACTG TAACAGTTGT (2) TGTCTGTCCT (4) TTTTTTTCCC (3) 161.4 0.1614 Adult retinal AAAAAAAAAA (2) AAAAACAAAA (2) ACTCCTCCCT CAGATCTGAA GACATTTTAC (2) GGCCTGGGGG GGTAGAACTG TAACAGTTGT (2) TGGAATGCAG (2) TGTCTGTCCT (4) TGTGTGAGGT 104 0.104 ONL AAAAAAAAAA (2) AAAAAACAAA (4) AAAAACAAAA (2) AACAAATGAA (2) AAGCAACTAA (2) ACTCCTCCCT AGGAAAACAG (2) CAGATCTGAA GGTAGAACTG TAACAGTTGT (2) TGTCTGTCCT (4) TTTTTTTCCC (3) 168.4 0.1684