Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.254027
Cln8
ceroid-lipofuscinosis, neuronal 8
8
8 6.0 cM
26889
Gene Ontology
endoplasmic reticulum
|
integral to membrane
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTTTCCTCT
(
3
)
AGTAACCCAT
ATTTTCAAGA
(
2
)
TGTGACTTAG
13
0.013
Cb medulloblastoma
ACTTTCCTCT
(
3
)
TGTGACTTAG
6.9
0.0069
P8 GC+1d culture
ATTTTCAAGA
(
2
)
TGTGACTTAG
3.4
0.0034
P8 GC+SHH+1d culture
ACTTTCCTCT
(
3
)
AGTAACCCAT
ATTTTCAAGA
(
2
)
TGTGACTTAG
13
0.013
3T3 fibroblasts
ACTTTCCTCT
(
3
)
3.5
0.0035
E15 cortex
ACTTTCCTCT
(
3
)
4.9
0.0049
P1 cortex
AGTAACCCAT
4.5
0.0045
Hypothalamus
ACTTTCCTCT
(
3
)
AGTAACCCAT
TGTGACTTAG
10.8
0.0108
E12.5 retina
ACTTTCCTCT
(
3
)
5.6
0.0056
E14.5 retina
ACTTTCCTCT
(
3
)
CAGGGATGGT
(
2
)
9.1
0.0091
E16.5 retina
ACTTTCCTCT
(
3
)
TGTGACTTAG
12.7
0.0127
E18.5 retina
ACTTTCCTCT
(
3
)
AGTAACCCAT
ATTTTCAAGA
(
2
)
TGTGACTTAG
10.9
0.0109
P0.5 retina
ACTTTCCTCT
(
3
)
TGTGACTTAG
4
0.004
P2.5 retina
ACTTTCCTCT
(
3
)
12.3
0.0123
P4.5 retina
ACTTTCCTCT
(
3
)
TGTGACTTAG
11.9
0.0119
P6.5 retina
ACTTTCCTCT
(
3
)
TGTGACTTAG
8.3
0.0083
P10.5 crx- retina
ACTTTCCTCT
(
3
)
TGTGACTTAG
7.5
0.0075
P10.5 crx+ retina
ACTTTCCTCT
(
3
)
TGTGACTTAG
3.8
0.0038
Adult retinal
ACTTTCCTCT
(
3
)
3.7
0.0037
ONL
ACTTTCCTCT
(
3
)
CAGGGATGGT
(
2
)
TGTGACTTAG
9.5
0.0095
