Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.255596	AU040972	expressed sequence AU040972	11		104522
Mm.255596	9530078B04Rik	RIKEN cDNA 9530078B04 gene	11		78850
Mm.255596	E030030H24Rik	RIKEN cDNA E030030H24 gene	11		320618
Mm.255596	Nf1	neurofibromatosis 1	11	11 46.06 cM	18015
Gene Ontology	GTPase activator activity | regulation of glial cell differentiation
Human Homolog	NF1[neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGCTGG (14) 1.6 0.0016 P8 Cb GC CCTTTAATTC (36) 1.6 0.0016 P8 Cb GC GATAACAAAC (5) 1.6 0.0016 Cb medulloblastoma TTGACGTCTG (4) 9.2 0.0092 Cb medulloblastoma CCTTTAATTC (36) 4.6 0.0046 P8 GC+1d culture TTGACGTCTG (4) 8 0.008 P8 GC+1d culture AAGCAGCTGG (14) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATTC (36) 7 0.007 P8 GC+SHH+1d culture TTGACGTCTG (4) 7 0.007 P8 GC+SHH+1d culture TTGAAATTAT (5) 3.5 0.0035 P8 GC+SHH+1d culture CCATCATCAG (6) 1.2 0.0012 P8 GC+SHH+1d culture GATAACAAAC (5) 1.2 0.0012 3T3 fibroblasts CCTTTAATTC (36) 7 0.007 E15 cortex TTGACGTCTG (4) 9.9 0.0099 E15 cortex TTGAAATTAT (5) 4.9 0.0049 P1 cortex CCTTTAATTC (36) 13.6 0.0136 P1 cortex CCATCATCAG (6) 4.5 0.0045 Hypothalamus AACACACACA (24) 5.4 0.0054 Hypothalamus TTGAAATTAT (5) 5.4 0.0054 Hypothalamus TTGACGTCTG (4) 3.6 0.0036 Hypothalamus AAGCAGCTGG (14) 1.8 0.0018 E12.5 retina CCTTTAATTC (36) 3.8 0.0038 E14.5 retina CCTTTAATTC (36) 7.3 0.0073 E14.5 retina AACACACACA (24) 1.8 0.0018 E14.5 retina TTGAAATTAT (5) 1.8 0.0018 E16.5 retina CCTTTAATTC (36) 3.6 0.0036 E16.5 retina AACACACACA (24) 1.8 0.0018 E16.5 retina TTGAAATTAT (5) 1.8 0.0018 E16.5 retina TTGACGTCTG (4) 1.8 0.0018 E18.5 retina GATAACAAAC (5) 5.5 0.0055 E18.5 retina TTGAAATTAT (5) 5.5 0.0055 E18.5 retina CCTTTAATTC (36) 1.8 0.0018 E18.5 retina TTGACGTCTG (4) 1.8 0.0018 P0.5 retina CCTTTAATTC (36) 5.9 0.0059 P2.5 retina TTGAAATTAT (5) 14.1 0.0141 P2.5 retina AAGCAGCTGG (14) 3.5 0.0035 P2.5 retina TTGACGTCTG (4) 3.5 0.0035 P2.5 retina CCTTTAATTC (36) 1.8 0.0018 P4.5 retina TTGAAATTAT (5) 9.9 0.0099 P4.5 retina TTGACGTCTG (4) 7.9 0.0079 P4.5 retina CCTTTAATTC (36) 4 0.004 P4.5 retina AACACACACA (24) 2 0.002 P4.5 retina AAGCAGCTGG (14) 2 0.002 P6.5 retina TTGACGTCTG (4) 6.7 0.0067 P6.5 retina CCTTTAATTC (36) 5 0.005 P6.5 retina AACACACACA (24) 1.7 0.0017 P6.5 retina AAGCAGCTGG (14) 1.7 0.0017 P10.5 crx- retina CCTTTAATTC (36) 1.9 0.0019 P10.5 crx+ retina TTGAAATTAT (5) 3.8 0.0038 P10.5 crx+ retina AACACACACA (24) 1.9 0.0019 P10.5 crx+ retina TTGACGTCTG (4) 1.9 0.0019 Adult retinal AACACACACA (24) 3.7 0.0037 Adult retinal CCATCATCAG (6) 1.9 0.0019 Adult retinal CCTTTAATTC (36) 1.9 0.0019 Adult retinal GATAACAAAC (5) 1.9 0.0019 ONL AACACACACA (24) 3.8 0.0038 ONL CCTTTAATTC (36) 3.8 0.0038