Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.259227	C330039G02Rik	RIKEN cDNA C330039G02 gene	4		230700
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	FOXJ3[forkhead box J3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAACTTA (6) GATGGCACTT TGGGTGCTGG (2) 16.3 0.0163 Cb medulloblastoma AATAAACTTA (6) GATGGCACTT GGAGTGAGGA TGGGTGCTGG (2) 34.6 0.0346 P8 GC+1d culture AATAAACTTA (6) GATGGCACTT TGGGTGCTGG (2) 21.7 0.0217 P8 GC+SHH+1d culture AATAAACTTA (6) GATGGCACTT TGGGTGCTGG (2) 17.5 0.0175 3T3 fibroblasts AATAAACTTA (6) GATGGCACTT GTCATAGCTG (2) TGGGTGCTGG (2) 35 0.035 E15 cortex GTCATAGCTG (2) TGGGTGCTGG (2) 19.7 0.0197 P1 cortex GATGGCACTT TGGGTGCTGG (2) 18.1 0.0181 Hypothalamus AATAAACTTA (6) ACCCAGCAAA GATGGCACTT TGGGTGCTGG (2) 34.5 0.0345 E12.5 retina AATAAACTTA (6) GATGGCACTT TGGGTGCTGG (2) 39.4 0.0394 E14.5 retina AATAAACTTA (6) GATGGCACTT GGAGTGAGGA TGGGTGCTGG (2) 63.8 0.0638 E16.5 retina AATAAACTTA (6) GATGGCACTT GGAGTGAGGA TGGGTGCTGG (2) 54.3 0.0543 E18.5 retina AATAAACTTA (6) CCTTAAGAAA GATGGCACTT TGGGTGCTGG (2) 41.8 0.0418 P0.5 retina AATAAACTTA (6) GATGGCACTT GTCATAGCTG (2) TGGGTGCTGG (2) 21.6 0.0216 P2.5 retina AATAAACTTA (6) ACCCAGCAAA GATGGCACTT GGAGTGAGGA GTCATAGCTG (2) TGGGTGCTGG (2) 38.8 0.0388 P4.5 retina AATAAACTTA (6) GATGGCACTT GTCATAGCTG (2) TGGGTGCTGG (2) 47.6 0.0476 P6.5 retina AATAAACTTA (6) ACCCAGCAAA GATGGCACTT GTCATAGCTG (2) TGGGTGCTGG (2) 48.3 0.0483 P10.5 crx- retina AATAAACTTA (6) ACCCAGCAAA CCTTAAGAAA GATGGCACTT TGGGTGCTGG (2) 29.8 0.0298 P10.5 crx+ retina AATAAACTTA (6) GATGGCACTT TGGGTGCTGG (2) 34.7 0.0347 Adult retinal AATAAACTTA (6) CCTTAAGAAA GATGGCACTT GTCATAGCTG (2) TGGGTGCTGG (2) 29.8 0.0298 ONL AATAAACTTA (6) CCTTAAGAAA GATGGCACTT GTCATAGCTG (2) TGGGTGCTGG (2) 55.4 0.0554