Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271944	Rab1	RAB1, member RAS oncogene family	11	11 10.9 cM	19324
Gene Ontology	DNA binding | endoplasmic reticulum | Golgi apparatus | GTP binding | GTPase activity | intracellular | intracellular protein transport | protein transport | protein transporter activity | regulation of transcription, DNA-dependent | small GTPase mediated signal transduction | two-component signal transduction system (phosphorelay) | vesicle-mediated transport
Human Homolog	RAB1A[RAB1A, member RAS oncogene family]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAATTTCA (2) CTCAGTCTGA GTACAAAAAT TTTAGATGTT 9.8 0.0098 Cb medulloblastoma GTACAAAAAT TTTAGATGTT 18.5 0.0185 P8 GC+1d culture CAAAATTTCA (2) CCAATATAAA GTACAAAAAT TATTTCAATT TTTAGATGTT 22.7 0.0227 P8 GC+SHH+1d culture CCAATATAAA CTCAGTCTGA GTACAAAAAT TTTAGATGTT 14.1 0.0141 3T3 fibroblasts ACGATGGCAG GTACAAAAAT TTTAGATGTT 10.5 0.0105 E15 cortex GTACAAAAAT TATTTCAATT 9.8 0.0098 Hypothalamus ACGATGGCAG CAAAATTTCA (2) GTACAAAAAT TTTAGATGTT 18 0.018 E12.5 retina CTCAGTCTGA GTACAAAAAT TTTAGATGTT 7.6 0.0076 E14.5 retina ACGATGGCAG CAAAATTTCA (2) GTACAAAAAT TAATGTTTTC (2) 9 0.009 E16.5 retina ACGATGGCAG CAAAATTTCA (2) CCAATATAAA GTACAAAAAT TATTTCAATT TTTAGATGTT 12.6 0.0126 E18.5 retina CAAAATTTCA (2) CCAATATAAA CTCAGTCTGA GTACAAAAAT TAATGTTTTC (2) TTTAGATGTT 27.2 0.0272 P0.5 retina CCAATATAAA GTACAAAAAT TTTAGATGTT 19.6 0.0196 P2.5 retina ACGATGGCAG CCAATATAAA CTCAGTCTGA GTACAAAAAT TAATGTTTTC (2) TTTAGATGTT 19.5 0.0195 P4.5 retina AACGCTAGAT (2) CAAAATTTCA (2) GTACAAAAAT TTTAGATGTT 10 0.01 P6.5 retina AACGCTAGAT (2) ACGATGGCAG CAAAATTTCA (2) CCAATATAAA CTCAGTCTGA GTACAAAAAT TATTTCAATT TTTAGATGTT 25.2 0.0252 P10.5 crx- retina CAAAATTTCA (2) GTACAAAAAT TATTTCAATT TTTAGATGTT 26.1 0.0261 P10.5 crx+ retina CAAAATTTCA (2) TAATGTTTTC (2) TATTTCAATT TTTAGATGTT 13.4 0.0134 Adult retinal CAAAATTTCA (2) CTCAGTCTGA GTACAAAAAT TTTAGATGTT 13.1 0.0131 ONL TTTAGATGTT 3.8 0.0038