Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.271986	5330414D10Rik	RIKEN cDNA 5330414D10 gene	2	2 H4	245867
Gene Ontology	protein modification | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | S-adenosylmethionine-dependent methyltransferase activity
Human Homolog	C20orf36[chromosome 20 open reading frame 36]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (3) GAACTTTAAG (4) 55.5 0.0555 Cb medulloblastoma CCTTTAATCC (3) GAACTTAAAG GAACTTTAAG (4) 57.8 0.0578 P8 GC+1d culture CAGACTATAA CCTTTAATCC (3) GAACTTAAAG GAACTTTAAG (4) TGACTCACCA 48 0.048 P8 GC+SHH+1d culture ATGTCTGCTC (2) CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) GGCGGCGCTG TGACTCACCA 40 0.04 3T3 fibroblasts CCTTTAATCC (3) CTCTAACTTG TGACTCACCA 80.6 0.0806 E15 cortex CCTTTAATCC (3) 54.4 0.0544 P1 cortex ACTTTAAATA (3) CCTTTAATCC (3) GAACTTTAAG (4) 163.5 0.1635 Hypothalamus ATGTCTGCTC (2) CCTTTAATCC (3) GAACTTAAAG GAACTTTAAG (4) GGCGGCGCTG TGTTTAAAAA (2) 37.9 0.0379 E12.5 retina CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG TGACTCACCA TGTTAAAAAA 90.1 0.0901 E14.5 retina ATGTCTGCTC (2) CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) 136.7 0.1367 E16.5 retina CAGACTATAA CCTTTAATCC (3) GAACTTAAAG 72.4 0.0724 E18.5 retina CCTTTAATCC (3) GAACTTAAAG GAACTTTAAG (4) GGCGGCGCTG TGTTAAAAAA 32.6 0.0326 P0.5 retina ATGTCTGCTC (2) CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) 82.5 0.0825 P2.5 retina CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) GGCGGCGCTG 93.4 0.0934 P4.5 retina CAGACTATAA CCTTTAATCC (3) GAACTTAAAG GAACTTTAAG (4) TGTTTAAAAA (2) 85.2 0.0852 P6.5 retina ACTTTAAATA (3) CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG TGTTTAAAAA (2) 108.3 0.1083 P10.5 crx- retina ACTTTAAATA (3) CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) TGACTCACCA 109.7 0.1097 P10.5 crx+ retina AGAATTTTCG CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) TGACTCACCA TGTTAAAAAA 72.9 0.0729 Adult retinal CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG TGACTCACCA 174.1 0.1741 ONL ACTTTAAATA (3) AGAATTTTCG CAGACTATAA CCTTTAATCC (3) CTCTAACTTG GAACTTAAAG GAACTTTAAG (4) TGACTCACCA 149.3 0.1493