Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.271986 5330414D10RikRIKEN cDNA 5330414D10 gene 2  2 H4  245867 
 Gene Ontology protein modification | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity | S-adenosylmethionine-dependent methyltransferase activity
 Human Homolog C20orf36[chromosome 20 open reading frame 36]
 Clusters 
   Neighbors    

Total 5 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 99 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCTTTAATCC (355)52.20.0522
P8 Cb GCGAACTTTAAG (6)3.30.0033
Cb medulloblastomaCCTTTAATCC (355)41.60.0416
Cb medulloblastomaGAACTTAAAG (2)11.60.0116
Cb medulloblastomaGAACTTTAAG (6)4.60.0046
P8 GC+1d cultureCCTTTAATCC (355)320.032
P8 GC+1d cultureCAGACTATAA (3)4.60.0046
P8 GC+1d cultureGAACTTTAAG (6)4.60.0046
P8 GC+1d cultureGAACTTAAAG (2)3.40.0034
P8 GC+1d cultureTGACTCACCA (2)3.40.0034
P8 GC+SHH+1d cultureCCTTTAATCC (355)25.80.0258
P8 GC+SHH+1d cultureGAACTTAAAG (2)5.90.0059
P8 GC+SHH+1d cultureTGACTCACCA (2)2.30.0023
P8 GC+SHH+1d cultureATGTCTGCTC (3)1.20.0012
P8 GC+SHH+1d cultureCAGACTATAA (3)1.20.0012
P8 GC+SHH+1d cultureCTCTAACTTG (2)1.20.0012
P8 GC+SHH+1d cultureGAACTTTAAG (6)1.20.0012
P8 GC+SHH+1d cultureGGCGGCGCTG (3)1.20.0012
3T3 fibroblastsCCTTTAATCC (355)70.10.0701
3T3 fibroblastsTGACTCACCA (2)70.007
3T3 fibroblastsCTCTAACTTG (2)3.50.0035
E15 cortexCCTTTAATCC (355)54.40.0544
P1 cortexCCTTTAATCC (355)154.50.1545
P1 cortexACTTTAAATA (4)4.50.0045
P1 cortexGAACTTTAAG (6)4.50.0045
HypothalamusCCTTTAATCC (355)19.90.0199
HypothalamusGAACTTAAAG (2)7.20.0072
HypothalamusGAACTTTAAG (6)3.60.0036
HypothalamusGGCGGCGCTG (3)3.60.0036
HypothalamusATGTCTGCTC (3)1.80.0018
HypothalamusTGTTTAAAAA (13)1.80.0018
E12.5 retinaCCTTTAATCC (355)75.10.0751
E12.5 retinaGAACTTAAAG (2)5.60.0056
E12.5 retinaTGACTCACCA (2)5.60.0056
E12.5 retinaCTCTAACTTG (2)1.90.0019
E12.5 retinaTGTTAAAAAA (4)1.90.0019
E14.5 retinaCCTTTAATCC (355)120.30.1203
E14.5 retinaGAACTTAAAG (2)5.50.0055
E14.5 retinaGAACTTTAAG (6)5.50.0055
E14.5 retinaATGTCTGCTC (3)3.60.0036
E14.5 retinaCTCTAACTTG (2)1.80.0018
E16.5 retinaCCTTTAATCC (355)68.80.0688
E16.5 retinaCAGACTATAA (3)1.80.0018
E16.5 retinaGAACTTAAAG (2)1.80.0018
E18.5 retinaCCTTTAATCC (355)23.60.0236
E18.5 retinaGAACTTAAAG (2)3.60.0036
E18.5 retinaGAACTTTAAG (6)1.80.0018
E18.5 retinaGGCGGCGCTG (3)1.80.0018
E18.5 retinaTGTTAAAAAA (4)1.80.0018
P0.5 retinaCCTTTAATCC (355)72.60.0726
P0.5 retinaGAACTTAAAG (2)3.90.0039
P0.5 retinaATGTCTGCTC (3)20.002
P0.5 retinaCTCTAACTTG (2)20.002
P0.5 retinaGAACTTTAAG (6)20.002
P2.5 retinaCCTTTAATCC (355)70.40.0704
P2.5 retinaGAACTTAAAG (2)14.10.0141
P2.5 retinaGAACTTTAAG (6)3.50.0035
P2.5 retinaCAGACTATAA (3)1.80.0018
P2.5 retinaCTCTAACTTG (2)1.80.0018
P2.5 retinaGGCGGCGCTG (3)1.80.0018
P4.5 retinaCCTTTAATCC (355)43.60.0436
P4.5 retinaGAACTTAAAG (2)19.80.0198
P4.5 retinaCAGACTATAA (3)11.90.0119
P4.5 retinaGAACTTTAAG (6)7.90.0079
P4.5 retinaTGTTTAAAAA (13)20.002
P6.5 retinaCCTTTAATCC (355)700.07
P6.5 retinaGAACTTAAAG (2)200.02
P6.5 retinaCAGACTATAA (3)8.30.0083
P6.5 retinaTGTTTAAAAA (13)50.005
P6.5 retinaCTCTAACTTG (2)3.30.0033
P6.5 retinaACTTTAAATA (4)1.70.0017
P10.5 crx- retinaCCTTTAATCC (355)63.20.0632
P10.5 crx- retinaGAACTTAAAG (2)18.60.0186
P10.5 crx- retinaCTCTAACTTG (2)9.30.0093
P10.5 crx- retinaGAACTTTAAG (6)7.40.0074
P10.5 crx- retinaTGACTCACCA (2)5.60.0056
P10.5 crx- retinaCAGACTATAA (3)3.70.0037
P10.5 crx- retinaACTTTAAATA (4)1.90.0019
P10.5 crx+ retinaCCTTTAATCC (355)38.40.0384
P10.5 crx+ retinaGAACTTAAAG (2)13.50.0135
P10.5 crx+ retinaCAGACTATAA (3)7.70.0077
P10.5 crx+ retinaAGAATTTTCG3.80.0038
P10.5 crx+ retinaGAACTTTAAG (6)3.80.0038
P10.5 crx+ retinaCTCTAACTTG (2)1.90.0019
P10.5 crx+ retinaTGACTCACCA (2)1.90.0019
P10.5 crx+ retinaTGTTAAAAAA (4)1.90.0019
Adult retinalCCTTTAATCC (355)129.60.1296
Adult retinalGAACTTAAAG (2)29.60.0296
Adult retinalCTCTAACTTG (2)9.30.0093
Adult retinalCAGACTATAA (3)3.70.0037
Adult retinalTGACTCACCA (2)1.90.0019
ONLCCTTTAATCC (355)84.30.0843
ONLGAACTTAAAG (2)47.90.0479
ONLCTCTAACTTG (2)5.70.0057
ONLTGACTCACCA (2)3.80.0038
ONLACTTTAAATA (4)1.90.0019
ONLAGAATTTTCG1.90.0019
ONLCAGACTATAA (3)1.90.0019
ONLGAACTTTAAG (6)1.90.0019