Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27330
Smarce1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
11
57376
Mm.27330
5830412H02Rik
RIKEN cDNA 5830412H02 gene
11
74752
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAGGTGGAAG
(
2
)
8.2
0.0082
P8 Cb GC
CTGTCAACCC
(
3
)
1.6
0.0016
P8 Cb GC
TGAGCATACT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGAGCATACT
(
2
)
6.9
0.0069
P8 GC+1d culture
GAGGTGGAAG
(
2
)
9.1
0.0091
P8 GC+1d culture
TGAGCATACT
(
2
)
5.7
0.0057
P8 GC+1d culture
GATGAACAGC
(
2
)
2.3
0.0023
P8 GC+1d culture
TTGTATCAAC
(
2
)
2.3
0.0023
P8 GC+1d culture
CTGTCAACCC
(
3
)
1.1
0.0011
P8 GC+1d culture
GATGAACGGC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGAGCATACT
(
2
)
12.9
0.0129
P8 GC+SHH+1d culture
GAGGTGGAAG
(
2
)
11.7
0.0117
P8 GC+SHH+1d culture
CTGTCAACCC
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
GATGAACAGC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TTGTATCAAC
(
2
)
1.2
0.0012
3T3 fibroblasts
CTGTCAACCC
(
3
)
3.5
0.0035
3T3 fibroblasts
GAGGTGGAAG
(
2
)
3.5
0.0035
3T3 fibroblasts
TGAGCATACT
(
2
)
3.5
0.0035
E15 cortex
GAGGTGGAAG
(
2
)
9.9
0.0099
E15 cortex
TGAGCATACT
(
2
)
4.9
0.0049
P1 cortex
TGAGCATACT
(
2
)
22.7
0.0227
Hypothalamus
GAGGTGGAAG
(
2
)
3.6
0.0036
Hypothalamus
TGAGCATACT
(
2
)
1.8
0.0018
Hypothalamus
TTGTATCAAC
(
2
)
1.8
0.0018
E12.5 retina
GAGGTGGAAG
(
2
)
7.5
0.0075
E12.5 retina
TGAGCATACT
(
2
)
7.5
0.0075
E12.5 retina
CTGTCAACCC
(
3
)
5.6
0.0056
E12.5 retina
TTGTATCAAC
(
2
)
5.6
0.0056
E12.5 retina
GATGAACAGC
(
2
)
3.8
0.0038
E14.5 retina
TGAGCATACT
(
2
)
7.3
0.0073
E14.5 retina
CTGTCAACCC
(
3
)
3.6
0.0036
E14.5 retina
GATGAACAGC
(
2
)
3.6
0.0036
E14.5 retina
TTGTATCAAC
(
2
)
1.8
0.0018
E16.5 retina
TGAGCATACT
(
2
)
10.9
0.0109
E16.5 retina
CTGTCAACCC
(
3
)
3.6
0.0036
E16.5 retina
GAGGTGGAAG
(
2
)
3.6
0.0036
E16.5 retina
GATGAACAGC
(
2
)
1.8
0.0018
E18.5 retina
GAGGTGGAAG
(
2
)
9.1
0.0091
E18.5 retina
TGAGCATACT
(
2
)
5.5
0.0055
E18.5 retina
CTGTCAACCC
(
3
)
1.8
0.0018
P0.5 retina
TGAGCATACT
(
2
)
11.8
0.0118
P0.5 retina
GAGGTGGAAG
(
2
)
9.8
0.0098
P0.5 retina
CTGTCAACCC
(
3
)
3.9
0.0039
P2.5 retina
GAGGTGGAAG
(
2
)
12.3
0.0123
P2.5 retina
TGAGCATACT
(
2
)
5.3
0.0053
P2.5 retina
GATGAACAGC
(
2
)
1.8
0.0018
P4.5 retina
GAGGTGGAAG
(
2
)
5.9
0.0059
P4.5 retina
CTGTCAACCC
(
3
)
4
0.004
P4.5 retina
TGAGCATACT
(
2
)
4
0.004
P6.5 retina
TGAGCATACT
(
2
)
8.3
0.0083
P6.5 retina
GAGGTGGAAG
(
2
)
3.3
0.0033
P10.5 crx- retina
TGAGCATACT
(
2
)
11.1
0.0111
P10.5 crx- retina
CTGTCAACCC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGAGCATACT
(
2
)
11.5
0.0115
P10.5 crx+ retina
GATGAACGGC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTGTATCAAC
(
2
)
1.9
0.0019
Adult retinal
GAGGTGGAAG
(
2
)
3.7
0.0037
Adult retinal
TGAGCATACT
(
2
)
1.9
0.0019
