Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.273379 Snx5sorting nexin 5 2  2 80.0 cM  69178 
 Gene Ontology intracellular signaling cascade | protein transport | transport
 Human Homolog SNX5[sorting nexin 5]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGCGACGCGGG (3)
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGAATAAATA
TTAAAAAAAA (2)
TTACCAAAAA
78.40.0784
Cb medulloblastomaACAGTGCCTA
GCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
TTACCAAAAA
175.70.1757
P8 GC+1d cultureACAGTGCCTA
CTTTATTCCA
GCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TGAATAAATA
TGTGTTTGTG (2)
TTAAAAAAAA (2)
TTACCATATG
112.90.1129
P8 GC+SHH+1d cultureCTTTATTCCA
GCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGAATAAATA
TGTGTTTGTG (2)
TTAAAAAAAA (2)
TTACCAAAAA
153.40.1534
3T3 fibroblastsCTTTATTCCA
GCGACGCGGG (3)
TAAAAAAAAA (3)
56.10.0561
E15 cortexTAAAAAAAAA (3)
TCTGTCTGAA (2)
TTAAAAAAAA (2)
24.70.0247
P1 cortexACAGTGCCTA
GCGACGCGGG (3)
TAAAAAAAAA (3)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
95.40.0954
HypothalamusAAGTCTTTCT (3)
ACAGTGCCTA
GCGACGCGGG (3)
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGAATAAATA
TTAAAAAAAA (2)
TTACCAAAAA
79.60.0796
E12.5 retinaAAGTCTTTCT (3)
GCGACGCGGG (3)
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGCTGGGATT (2)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
52.70.0527
E14.5 retinaAAGCTTTCTC (3)
GCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TTAAAAAAAA (2)
69.20.0692
E16.5 retinaGCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
48.80.0488
E18.5 retinaAAGTCTTTCT (3)
ACAGTGCCTA
GCGACGCGGG (3)
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGAATAAATA
TGCTGGGATT (2)
TTAAAAAAAA (2)
TTACCAAAAA
196.40.1964
P0.5 retinaGCGACGCGGG (3)
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGAATAAATA
TGTGTTTGTG (2)
TTAAAAAAAA (2)
80.60.0806
P2.5 retinaACAGTGCCTA
CTTTATTCCA
GCGACGCGGG (3)
TAAAAAAAAA (3)
TGAATAAATA
TGCTGGGATT (2)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
132.10.1321
P4.5 retinaGCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TGAATAAATA
TTAAAAAAAA (2)
192.30.1923
P6.5 retinaGCGACGCGGG (3)
TAAAAAAAAA (3)
TGAATAAATA
TGCTGGGATT (2)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
103.40.1034
P10.5 crx- retinaAAGCTTTCTC (3)
GCGACGCGGG (3)
GCTGTCGGGT
TAAAAAAAAA (3)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
TTACCATATG
33.60.0336
P10.5 crx+ retinaAAGCTTTCTC (3)
GCGACGCGGG (3)
TAAAAAAAAA (3)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
46.20.0462
Adult retinalGCGACGCGGG (3)
TAAAAAAAAA (3)
TGCTGGGATT (2)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
33.40.0334
ONLAAGTCTTTCT (3)
GCGACGCGGG (3)
TAAAAAAAAA (3)
TCTGTCTGAA (2)
TGCTGGGATT (2)
TGTGTTTGTG (2)
TTAAAAAAAA (2)
TTACCAAAAA
53.50.0535