Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274425	Tia1	cytotoxic granule-associated RNA binding protein 1	6	6 D2	21841
Gene Ontology	apoptosis | cytoplasm | nucleus | RNA binding
Human Homolog	TIA1[TIA1 cytotoxic granule-associated RNA binding protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 129 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTTCTTCT (3) GAGCCAGTAT TAATATAGAT TACCAGGAAC TTGATTTGCT 81.5 0.0815 Cb medulloblastoma ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT 94.7 0.0947 P8 GC+1d culture AATTTTAAGA ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TGAATATCAC 34.1 0.0341 P8 GC+SHH+1d culture ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TACCAGGAAC TGTTTGTTGG (2) TTGATTTGCT 31.6 0.0316 3T3 fibroblasts GAGCCAGTAT 3.5 0.0035 E15 cortex CCCTTCTTCT (3) GAGCCAGTAT 168.2 0.1682 P1 cortex ATCAAAAAAA (2) CCCTTCTTCT (3) GCCACGTATA GCTTTGGTCT TGGAGGGACG 27.1 0.0271 Hypothalamus ATCAAAAAAA (2) CAAAATGCTG CCCTTCTTCT (3) GAGCCAGTAT TTGATTTGCT 50.6 0.0506 E12.5 retina ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT 84.6 0.0846 E14.5 retina AATTTTAGGA ATCAAAAAAA (2) CCCTTCTTCT (3) GAAAAAGAGA (2) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA TAATATAGAT TACCAGGAAC TGGAGGGACG 83.6 0.0836 E16.5 retina ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA TAATATAGAT TACCAGGAAC TGGAGGGACG 57.8 0.0578 E18.5 retina ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TGAATATCAC TTGATTTGCT 56.5 0.0565 P0.5 retina ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT 43.3 0.0433 P2.5 retina ATCAAAAAAA (2) CAAAATGCTG CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT 79.3 0.0793 P4.5 retina AATTTTAAGA ATCAAAAAAA (2) CCCTTCTTCT (3) CTTGCGTCCT GAGCCAGTAT GCCACGTATA TAATATAGAT 63.5 0.0635 P6.5 retina ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TGGAGGGACG 53.2 0.0532 P10.5 crx- retina AATTTTAAGA AATTTTAGGA ATCAAAAAAA (2) CTTGCGTCCT GAGCCAGTAT GCCACGTATA GCTTTGGTCT 42.8 0.0428 P10.5 crx+ retina ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TGTTTGTTGG (2) 73 0.073 Adult retinal ATCAAAAAAA (2) CCCTTCTTCT (3) GAGCCAGCAG (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TACCAGGAAC TGTTTGTTGG (2) 26.2 0.0262 ONL AATTTTAGGA CTTGCGTCCT GAAAAAGAGA (2) GAGCCAGTAT GCCACGTATA GCTTTGGTCT TAATATAGAT TACCAGGAAC TGAATATCAC 26.6 0.0266