Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.276137	Atp5a1	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1	18	18 50.0 cM	11946
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | extracellular space | hydrogen ion transporter activity | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | mitochondrion | proton transport | proton-transporting ATP synthase complex (sensu Eukarya) | proton-transporting two-sector ATPase complex
Human Homolog	ATP5A1[ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1, cardiac muscle] | ATP5A1[ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit, isoform 1, cardiac muscle]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 117 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATAAAAGCT (2) AATAAAAGTT (2) AATTAAAGTT (2) ATCTCCCAGG CCTCTAACAC GATAGATAAT GCTATTGAAG GGCTGAGGAA (2) 63.7 0.0637 Cb medulloblastoma AATAAAAGTC AATAAAAGTT (2) GAGATTTCTT GATAGATAAT TGATTTCTGT 104 0.104 P8 GC+1d culture AATAAAAGCT (2) AATAAAAGTT (2) AATTAAAGTT (2) CGGGATGCCC GATAGATAAT GCTATTGAAG TTGAGTTCCA 49 0.049 P8 GC+SHH+1d culture AATAAAAGTT (2) AATTAAAGTT (2) GAGATTTCTT GATAGATAAT GCTATTGAAG TGATTTCTGT 64.4 0.0644 3T3 fibroblasts GATAGATAAT 3.5 0.0035 E15 cortex AATAAAAGTT (2) GATAGATAAT 14.8 0.0148 P1 cortex AATAAAAGTT (2) AATTAAAGTT (2) ACCCAACATC ATCTCCCAGG CGGGATGCCC GATAGATAAT GCCCCCCCGC 49.9 0.0499 Hypothalamus AATAAAAGTC AATAAAAGTT (2) ATCTCCCAGG GATAGATAAT GGAGAGTACT TGATTTCTGT 48.8 0.0488 E12.5 retina AAGTCGTGCT AATAAAAGTT (2) GAGATTTCTT GATAGATAAT GCTATTGAAG 50.8 0.0508 E14.5 retina AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) GATAGATAAT GCCCCCCCGC GGAGAGTACT GGCTGAGGAA (2) TGATTTCTGT 47.2 0.0472 E16.5 retina AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) ACCCAACATC ATTGCCCTTG GATAGATAAT GGAGAGTACT GGCTGAGGAA (2) TGATTTCTGT TTGAGTTCCA 74.2 0.0742 E18.5 retina AATAAAAGTT (2) AATTAAAGTT (2) CCTCTAACAC GATAGATAAT GCCCCCCCGC GGAGAGTACT TGATTTCTGT 70.8 0.0708 P0.5 retina AATAAAAGTT (2) ATCTCCCAGG GAGATTTCTT GATAGATAAT GGAGAGTACT TGATTTCTGT 29.5 0.0295 P2.5 retina AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) GATAGATAAT GCTATTGAAG 42.3 0.0423 P4.5 retina AATAAAAGTT (2) AATTAAAGTT (2) ATTGCCCTTG CCTCTAACAC GATAGATAAT GCTATTGAAG TTGAGTTCCA 59.6 0.0596 P6.5 retina AAGTCGTGCT AATAAAAGTT (2) AATTAAAGTT (2) ATCTCCCAGG GATAGATAAT 51.5 0.0515 P10.5 crx- retina AATAAAAGTC AATAAAAGTT (2) AATTAAAGTT (2) ATCTCCCAGG GATAGATAAT 63.3 0.0633 P10.5 crx+ retina AAGTCGTGCT AATAAAAGTT (2) GATAGATAAT GGCTGAGGAA (2) TGATTTCTGT 55.7 0.0557 Adult retinal AATAAAAGTT (2) ATCTCCCAGG GATAGATAAT TGATTTCTGT 24.2 0.0242 ONL AATAAAAGCT (2) AATAAAAGTT (2) AATTAAAGTT (2) ATTGCCCTTG GATAGATAAT GCTATTGAAG TGATTTCTGT TTGAGTTCCA 59.3 0.0593