Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276381
AI225873
EST AI225873
6
30896
Mm.276381
Tnpo3
transportin 3
6
6 7.2 cM
320938
Gene Ontology
nucleus
|
protein transport
|
receptor activity
|
transport
Human Homolog
TNPO3[transportin 3]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GAAGAAATCA
(
7
)
6.5
0.0065
P8 Cb GC
GGGTGGGAAG
(
3
)
6.5
0.0065
P8 Cb GC
AGGGAGTTCC
(
4
)
3.3
0.0033
Cb medulloblastoma
GAAGAAATCA
(
7
)
6.9
0.0069
Cb medulloblastoma
AAAATGAAGA
(
3
)
2.3
0.0023
P8 GC+1d culture
GGGTGGGAAG
(
3
)
12.6
0.0126
P8 GC+1d culture
GAGGGAGCCA
(
3
)
5.7
0.0057
P8 GC+1d culture
CAGTGCACAC
(
2
)
1.1
0.0011
P8 GC+1d culture
TTGATTTTCT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGTGGGAAG
(
3
)
18.7
0.0187
3T3 fibroblasts
GGGTGGGAAG
(
3
)
28
0.028
3T3 fibroblasts
CAGGTTGACA
(
2
)
10.5
0.0105
E15 cortex
GGGTGGGAAG
(
3
)
29.7
0.0297
P1 cortex
CAGGTTGACA
(
2
)
4.5
0.0045
P1 cortex
GGGTGGGAAG
(
3
)
4.5
0.0045
Hypothalamus
GGGTGGGAAG
(
3
)
3.6
0.0036
Hypothalamus
GAAGAAATCA
(
7
)
1.8
0.0018
Hypothalamus
GAGGGAGCCA
(
3
)
1.8
0.0018
E12.5 retina
GGGTGGGAAG
(
3
)
18.8
0.0188
E12.5 retina
CAGGTTGACA
(
2
)
5.6
0.0056
E12.5 retina
GAAGAAATCA
(
7
)
1.9
0.0019
E14.5 retina
GGGTGGGAAG
(
3
)
14.6
0.0146
E14.5 retina
CAGTGCACAC
(
2
)
1.8
0.0018
E14.5 retina
GAGGGAGCCA
(
3
)
1.8
0.0018
E16.5 retina
GGGTGGGAAG
(
3
)
16.3
0.0163
E16.5 retina
CAGTGCACAC
(
2
)
1.8
0.0018
E16.5 retina
GAGGGAGCCA
(
3
)
1.8
0.0018
E18.5 retina
GGGTGGGAAG
(
3
)
7.3
0.0073
E18.5 retina
AGGGAGTTCC
(
4
)
1.8
0.0018
E18.5 retina
GAAGAAATCA
(
7
)
1.8
0.0018
E18.5 retina
TTGATTTTCT
(
2
)
1.8
0.0018
P0.5 retina
GGGTGGGAAG
(
3
)
11.8
0.0118
P0.5 retina
AAAATGAAGA
(
3
)
2
0.002
P0.5 retina
GAGGGAGCCA
(
3
)
2
0.002
P2.5 retina
GGGTGGGAAG
(
3
)
28.2
0.0282
P2.5 retina
AAAATGAAGA
(
3
)
1.8
0.0018
P2.5 retina
CAGGTTGACA
(
2
)
1.8
0.0018
P2.5 retina
GAAGAAATCA
(
7
)
1.8
0.0018
P4.5 retina
GGGTGGGAAG
(
3
)
13.9
0.0139
P4.5 retina
GAGGGAGCCA
(
3
)
2
0.002
P4.5 retina
TTGATTTTCT
(
2
)
2
0.002
P6.5 retina
GGGTGGGAAG
(
3
)
23.3
0.0233
P6.5 retina
GAGGGAGCCA
(
3
)
1.7
0.0017
P10.5 crx- retina
GAAGAAATCA
(
7
)
5.6
0.0056
P10.5 crx- retina
GGGTGGGAAG
(
3
)
5.6
0.0056
P10.5 crx- retina
AGGGAGTTCC
(
4
)
1.9
0.0019
P10.5 crx+ retina
GGGTGGGAAG
(
3
)
9.6
0.0096
P10.5 crx+ retina
CAGGTTGACA
(
2
)
1.9
0.0019
P10.5 crx+ retina
GAAGAAATCA
(
7
)
1.9
0.0019
P10.5 crx+ retina
GAGGGAGCCA
(
3
)
1.9
0.0019
Adult retinal
CAGGTTGACA
(
2
)
3.7
0.0037
Adult retinal
GAGGGAGCCA
(
3
)
3.7
0.0037
Adult retinal
GGGTGGGAAG
(
3
)
3.7
0.0037
Adult retinal
GAAGAAATCA
(
7
)
1.9
0.0019
ONL
GGGTGGGAAG
(
3
)
5.7
0.0057
ONL
GAGGGAGCCA
(
3
)
3.8
0.0038
ONL
GAAGAAATCA
(
7
)
1.9
0.0019
