Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.277661	Lrpap1	low density lipoprotein receptor-related protein associated protein 1	5	5 20.0 cM	16976
Gene Ontology	endoplasmic reticulum | extracellular space | heparin binding | receptor activity
Human Homolog	LRPAP1[low density lipoprotein receptor-related protein associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGAGTTTT GGTTCACACA TGTACCTGTA 22.9 0.0229 Cb medulloblastoma GAGAACCTGA GCAGAGTTTT GGCCCACATC (4) GGTTCACACA 55.5 0.0555 P8 GC+1d culture GAGAAGCTGA (2) GCAGAGTTTT GCCCACATCA (2) GGCCCACATC (4) GGTTCACACA TCATCGGCTT 44.4 0.0444 P8 GC+SHH+1d culture GCAGAGTTTT GGCCCACATC (4) GGTTCACACA 25.8 0.0258 3T3 fibroblasts GCCCACATCA (2) 3.5 0.0035 E15 cortex GCAGAGTTTT GGCCCACATC (4) 29.6 0.0296 P1 cortex GAGAAGCTGA (2) GCCCACATCA (2) GGCCCACATC (4) 13.5 0.0135 Hypothalamus GAGAAGCTGA (2) GCAGAGTTTT GCCCACATCA (2) GGCCCACATC (4) GGTTCACACA 61.6 0.0616 E12.5 retina GCAGAGTTTT GCCCACATCA (2) GGCCCACATC (4) GGTTCACACA 18.8 0.0188 E14.5 retina GCAGAGTTTT GGTTCACACA 18.2 0.0182 E16.5 retina GCAGAGTTTT GGCCCACATC (4) GGTTCACACA 16.2 0.0162 E18.5 retina GCAGAGTTTT GGCCCACATC (4) GGTTCACACA 30.9 0.0309 P0.5 retina GAGAACCTGA GCAGAGTTTT GCCCACATCA (2) GGTTCACACA 8 0.008 P2.5 retina GCAGAGTTTT GGTTCACACA 21.1 0.0211 P4.5 retina GCAGAGTTTT GGTTCACACA 47.5 0.0475 P6.5 retina GCAGAGTTTT GGCCCACATC (4) GGTTCACACA TGTACCTGTA 18.4 0.0184 P10.5 crx- retina GCAGAGTTTT GGCCCACATC (4) GGTTCACACA TCATCGGCTT 29.7 0.0297 P10.5 crx+ retina GAGAAGCTGA (2) GCAGAGTTTT GGTTCACACA 34.6 0.0346 Adult retinal GCAGAGTTTT GGCCCACATC (4) GGTTCACACA 22.3 0.0223 ONL GAGAACCTGA GGTTCACACA 9.6 0.0096