| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACCAGCTGC (2) CTGGTAACAC GAAGGGATGT (2)
| 4.8 | 0.0048 |
| Cb medulloblastoma | TCCCTGCTCT (3)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CTGGTAACAC TGACGTACCA TTTGTCTTTG
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | ATGAAAGGGA (2) TGACGTACCA
| 2.4 | 0.0024 |
| 3T3 fibroblasts | AACCAGCTGC (2) GAAGGGATGT (2) TCCCTGCTCT (3)
| 10.5 | 0.0105 |
| P1 cortex | CTGGTAACAC
| 4.5 | 0.0045 |
| Hypothalamus | AACCAGCTGC (2) TGACGTACCA
| 3.6 | 0.0036 |
| E12.5 retina | AACCAGCTGC (2) ATGGGAAGCA CTGGTAACAC GAAGGGATGT (2) TTTGTCTTTG
| 11.4 | 0.0114 |
| E14.5 retina | AACCAGCTGC (2) ATGAAAGGGA (2)
| 7.3 | 0.0073 |
| E16.5 retina | AACCAGCTGC (2) ATGAAAGGGA (2) CTGGTAACAC TCCCTGCTCT (3) TGACGTACCA
| 10.8 | 0.0108 |
| E18.5 retina | ATGGGAAGCA CTGGTAACAC TGACGTACCA
| 10.9 | 0.0109 |
| P2.5 retina | AACCAGCTGC (2) CTGGTAACAC TCCCTGCTCT (3)
| 5.4 | 0.0054 |
| P4.5 retina | ATGGGAAGCA CTGGTAACAC GAAGGGATGT (2) TGACGTACCA TTTGTCTTTG
| 14 | 0.014 |
| P6.5 retina | ATGAAAGGGA (2) CTGGTAACAC GAAGGGATGT (2) TGACGTACCA TTTGTCTTTG
| 13.4 | 0.0134 |
| P10.5 crx- retina | ATGGGAAGCA TGACGTACCA
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AACCAGCTGC (2) ATGAAAGGGA (2) ATGGGAAGCA CTGGTAACAC TTTGTCTTTG
| 11.4 | 0.0114 |
| ONL | GAAGGGATGT (2)
| 1.9 | 0.0019 |