Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.280068
Chc1l
chromosome condensation 1-like
14
105670
Gene Ontology
protein binding
Human Homolog
CHC1L[chromosome condensation 1-like]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 28 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATAATTATT
6.5
0.0065
Cb medulloblastoma
CAGACCTCAA
(
2
)
TGGGGCCAGT
4.6
0.0046
P8 GC+1d culture
CAGACCTCAA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGACCTCAA
(
2
)
TGGGGCCAGT
4.6
0.0046
3T3 fibroblasts
CAGACCTCAA
(
2
)
3.5
0.0035
P1 cortex
CAGACCTCAA
(
2
)
18.2
0.0182
Hypothalamus
CAGACCTCAA
(
2
)
TATAATTATT
TGGGGCCAGT
5.4
0.0054
E12.5 retina
AGAGGAGGAA
TATAATTATT
3.8
0.0038
E14.5 retina
CAGACCTCAA
(
2
)
TATAATTATT
10.9
0.0109
E16.5 retina
TATAATTATT
1.8
0.0018
E18.5 retina
CAGACCTCAA
(
2
)
TATAATTATT
5.4
0.0054
P0.5 retina
AGAGGAGGAA
TGGGGCCAGT
4
0.004
P2.5 retina
CAGACCTCAA
(
2
)
TATAATTATT
3.6
0.0036
P4.5 retina
CAGACCTCAA
(
2
)
5.9
0.0059
P6.5 retina
AGAGGAGGAA
CAGACCTCAA
(
2
)
5
0.005
P10.5 crx+ retina
CAGACCTCAA
(
2
)
TGGGGCCAGT
3.8
0.0038
Adult retinal
CAGACCTCAA
(
2
)
1.9
0.0019
