Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.280083	Rpl4	ribosomal protein L4	9		67891
Gene Ontology	intracellular | metabolism | oxidoreductase activity | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL4[ribosomal protein L4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 200 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTCAAACTTA TGAAAGAGCT (3) TGGGCCGTTT TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGGCAAA TTGAAGCTGA TTTGAAACTG (3) TTTGCACCAA (2) 213.7 0.2137 Cb medulloblastoma CTTGCACCAA GTCAAACTTA TGGCAAAAAA (3) TGGCGACAAA TGGTAAAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGGCCAA 184.8 0.1848 P8 GC+1d culture GCTTGTGCCC (2) GTCAAACTTA TGATAAAAAA TGGCGACAAA TGGTAAAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACAAG TGGTGACGAA TGGTGACTAA (2) TTTGAAACTG (3) TTTGATTTAT TTTGCACCAA (2) 181.4 0.1814 P8 GC+SHH+1d culture CTTGCACCAA GTCAAACTTA TGGCAAAAAA (3) TGGCGACAAA TGGGCCGTTT TGGTAAAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACAAG TGGTGACTAA (2) TGGTGGCAAA TGGTGGCCAA TTGAAGCTGA TTTGATTTAT TTTGCACCAA (2) 291.7 0.2917 3T3 fibroblasts TGGTGACAAA TGGTGACTAA (2) TTTGCACCAA (2) 45.6 0.0456 E15 cortex TAGAAGCTGA TGGGACAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGCCCAA TTTGAAACTG (3) 88.8 0.0888 P1 cortex TGGGACAAAA TGGTGACAAA TGGTGACTAA (2) TGGTGCCCAA TGGTGGCAAA TTGAAGCTGA TTTGAAACTG (3) 63.4 0.0634 Hypothalamus TAGAAGCTGA TGGCAAAAAA (3) TGGCGACAAA TGGGCCGTTT TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGCAAAA TGGTGCCAAA TGGTGCCCAA TGGTGGCAAA TGGTGGCCAA TTGAAGCTGA TTTGATTTAT 235.3 0.2353 E12.5 retina GCTTGTGCCC (2) GTCAAACTTA TGGGACAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGCAAAA TTTGATTTAT 338 0.338 E14.5 retina ATTCTCAGGT CACAAGATGA GCTTGTGCCC (2) GTCAAACTTA TGGTAAAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACAAG TGGTGACTAA (2) TGGTGCAAAA TGGTGGCAAA TGGTGGCCAA TTGAAGCTGA TTTGAAACTG (3) TTTGATTTAT 413.3 0.4133 E16.5 retina ATTCTCAGGT CACAAGATGA GTCAAACTTA TGAAAGAGCT (3) TGGCAAAAAA (3) TGGCGACAAA TGGGCCGTTT TGGTGAAAAA (2) TGGTGACAAA TGGTGACGAA TGGTGACTAA (2) TGGTGGCCAA TTGAAGCTGA TTTGAAACTG (3) TTTGATTTAT 284 0.284 E18.5 retina GTCAAACTTA TAGAAGCTGA TGAAAGAGCT (3) TGATAAAAAA TGGCAAAAAA (3) TGGCGACAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACAAG TGGTGACTAA (2) TGGTGCCAAA TGGTGCCCAA TGGTGGCCAA TTTGAAACTG (3) TTTGATTTAT 485.5 0.4855 P0.5 retina GTCAAACTTA TGGCAAAAAA (3) TGGCGACAAA TGGGCCGTTT TGGTAAAAAA TGGTGACAAA TGGTGACTAA (2) TGGTGCCAAA TGGTGGCAAA TGGTGGCCAA TTGAAGCTGA TTTGAAACTG (3) 167.1 0.1671 P2.5 retina GTCAAACTTA TGGCAAAAAA (3) TGGTGACAAA TGGTGACAAG TGGTGACTAA (2) TGGTGGCAAA TTGAAGCTGA TTTGAAACTG (3) 184.9 0.1849 P4.5 retina GTCAAACTTA TGATAAAAAA TGGCAAAAAA (3) TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGGCAAA TGGTGGCCAA 226 0.226 P6.5 retina TGAAAGAGCT (3) TGGCGACAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TTTGAAACTG (3) TTTGCACCAA (2) 183.5 0.1835 P10.5 crx- retina CACAAGATGA CTTGCACCAA GCTTGTGCCC (2) GTCAAACTTA TGAAAGAGCT (3) TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TGGTGGCCAA TTGAAGCTGA TTTGAAACTG (3) TTTGATTTAT TTTGCACCAA (2) 91.3 0.0913 P10.5 crx+ retina GCTTGTGCCC (2) GTCAAACTTA TGATAAAAAA TGGTAAAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACTAA (2) TTTGAAACTG (3) TTTGATTTAT 172.9 0.1729 Adult retinal TAGAAGCTGA TGAAAGAGCT (3) TGGTAAAAAA TGGTGAAAAA (2) TGGTGACAAA TGGTGACAAG TGGTGACTAA (2) TGGTGCAAAA TTTGAAACTG (3) 72.5 0.0725 ONL TGGCAAAAAA (3) TGGTGAAAAA (2) TGGTGACAAA 45.9 0.0459