Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282039	Acly	ATP citrate lyase	11		104112
Mm.282039	A730098H14Rik	RIKEN cDNA A730098H14 gene	11		319932
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGCTTTAA (10) 32.6 0.0326 P8 Cb GC GAACATTTCA (5) 4.9 0.0049 P8 Cb GC TAAGCCAAGG (3) 3.3 0.0033 P8 Cb GC AGGCCTTGGC (5) 1.6 0.0016 P8 Cb GC GATCTTTGTG (4) 1.6 0.0016 P8 Cb GC GGGGCAGGGA (4) 1.6 0.0016 P8 Cb GC TGCAACAATG (2) 1.6 0.0016 P8 Cb GC TGGATGCCTG (4) 1.6 0.0016 Cb medulloblastoma GTGTCTCTTC (10) 11.6 0.0116 Cb medulloblastoma TGGATGCCTG (4) 6.9 0.0069 Cb medulloblastoma TTTGCTTTAA (10) 6.9 0.0069 Cb medulloblastoma GAACATTTCA (5) 4.6 0.0046 Cb medulloblastoma TGCAACAATG (2) 4.6 0.0046 Cb medulloblastoma AGGCCTTGGC (5) 2.3 0.0023 Cb medulloblastoma GGGGCAGGGA (4) 2.3 0.0023 P8 GC+1d culture TTTGCTTTAA (10) 19.4 0.0194 P8 GC+1d culture TGGATGCCTG (4) 16 0.016 P8 GC+1d culture CAGCCGACTT (2) 2.3 0.0023 P8 GC+1d culture GAACATTTCA (5) 2.3 0.0023 P8 GC+1d culture GTGTCTCTTC (10) 2.3 0.0023 P8 GC+1d culture TGGTGTAGTA (3) 2.3 0.0023 P8 GC+1d culture CTCAGGAACT (4) 1.1 0.0011 P8 GC+1d culture GGGGCAGGGA (4) 1.1 0.0011 P8 GC+1d culture TGCAACAATG (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTGCTTTAA (10) 38.6 0.0386 P8 GC+SHH+1d culture GGGGCAGGGA (4) 4.7 0.0047 P8 GC+SHH+1d culture GAACATTTCA (5) 3.5 0.0035 P8 GC+SHH+1d culture CAGACATCTC (6) 2.3 0.0023 P8 GC+SHH+1d culture TGGATGCCTG (4) 2.3 0.0023 P8 GC+SHH+1d culture GTGTCTCTTC (10) 1.2 0.0012 P8 GC+SHH+1d culture TCTCTCCCAG (3) 1.2 0.0012 3T3 fibroblasts TGGATGCCTG (4) 10.5 0.0105 3T3 fibroblasts GGGGCAGGGA (4) 3.5 0.0035 3T3 fibroblasts TTTGCTTTAA (10) 3.5 0.0035 E15 cortex TGGATGCCTG (4) 19.8 0.0198 E15 cortex GGGGCAGGGA (4) 9.9 0.0099 E15 cortex GTGTCTCTTC (10) 9.9 0.0099 P1 cortex TTTGCTTTAA (10) 18.2 0.0182 P1 cortex TGGATGCCTG (4) 9.1 0.0091 P1 cortex GCAGCTTACA (10) 4.5 0.0045 Hypothalamus TTTGCTTTAA (10) 21.7 0.0217 Hypothalamus TCTCTCCCAG (3) 5.4 0.0054 Hypothalamus TAAGCCAAGG (3) 3.6 0.0036 Hypothalamus AGGAGATGGG (6) 1.8 0.0018 Hypothalamus AGGCCTTGGC (5) 1.8 0.0018 Hypothalamus CAGACATCTC (6) 1.8 0.0018 Hypothalamus CTCAGGAACT (4) 1.8 0.0018 Hypothalamus TGCAACAATG (2) 1.8 0.0018 E12.5 retina TTTGCTTTAA (10) 22.5 0.0225 E12.5 retina GAACATTTCA (5) 11.3 0.0113 E12.5 retina TGGATGCCTG (4) 7.5 0.0075 E12.5 retina GCAGCTTACA (10) 1.9 0.0019 E12.5 retina GGGGCAGGGA (4) 1.9 0.0019 E12.5 retina TGGTGTAGTA (3) 1.9 0.0019 E12.5 retina TTACAGACCC (2) 1.9 0.0019 E14.5 retina TTTGCTTTAA (10) 43.7 0.0437 E14.5 retina GTGTCTCTTC (10) 12.8 0.0128 E14.5 retina GAACATTTCA (5) 3.6 0.0036 E14.5 retina GCAGCTTACA (10) 3.6 0.0036 E14.5 retina GAAGGCCGAC (2) 1.8 0.0018 E14.5 retina TGGTGTAGTA (3) 1.8 0.0018 E16.5 retina TTTGCTTTAA (10) 47.1 0.0471 E16.5 retina CAGCCGACTT (2) 5.4 0.0054 E16.5 retina GAACATTTCA (5) 5.4 0.0054 E16.5 retina GGGGCAGGGA (4) 5.4 0.0054 E16.5 retina AGGCCTTGGC (5) 3.6 0.0036 E16.5 retina CAGACATCTC (6) 3.6 0.0036 E16.5 retina TAAGCCAAGG (3) 1.8 0.0018 E16.5 retina TGGATGCCTG (4) 1.8 0.0018 E16.5 retina TGGTGTAGTA (3) 1.8 0.0018 E18.5 retina TTTGCTTTAA (10) 41.8 0.0418 E18.5 retina GAACATTTCA (5) 9.1 0.0091 E18.5 retina TGGATGCCTG (4) 5.5 0.0055 E18.5 retina GGGGCAGGGA (4) 3.6 0.0036 E18.5 retina GTGTCTCTTC (10) 3.6 0.0036 E18.5 retina GCAGCTTACA (10) 1.8 0.0018 E18.5 retina TGCAACAATG (2) 1.8 0.0018 P0.5 retina TGGATGCCTG (4) 21.6 0.0216 P0.5 retina TTTGCTTTAA (10) 15.7 0.0157 P0.5 retina GCAGCTTACA (10) 7.9 0.0079 P0.5 retina GGGGCAGGGA (4) 7.9 0.0079 P0.5 retina AGGCCTTGGC (5) 3.9 0.0039 P0.5 retina GAACATTTCA (5) 3.9 0.0039 P0.5 retina CAGACATCTC (6) 2 0.002 P0.5 retina CTCAGGAACT (4) 2 0.002 P0.5 retina GTGTCTCTTC (10) 2 0.002 P2.5 retina TTTGCTTTAA (10) 38.7 0.0387 P2.5 retina GAACATTTCA (5) 7 0.007 P2.5 retina TGGATGCCTG (4) 7 0.007 P2.5 retina GGGGCAGGGA (4) 5.3 0.0053 P2.5 retina AGGAGATGGG (6) 1.8 0.0018 P2.5 retina CAGACATCTC (6) 1.8 0.0018 P2.5 retina GAAGGCCGAC (2) 1.8 0.0018 P2.5 retina GATCTTTGTG (4) 1.8 0.0018 P2.5 retina TGGGATGGCT (5) 1.8 0.0018 P4.5 retina TTTGCTTTAA (10) 47.6 0.0476 P4.5 retina TGGATGCCTG (4) 11.9 0.0119 P4.5 retina GGGGCAGGGA (4) 7.9 0.0079 P4.5 retina GAAGGCCGAC (2) 2 0.002 P4.5 retina GCAGCTTACA (10) 2 0.002 P4.5 retina GTGTCTCTTC (10) 2 0.002 P6.5 retina TTTGCTTTAA (10) 48.4 0.0484 P6.5 retina GGGGCAGGGA (4) 13.3 0.0133 P6.5 retina TGGATGCCTG (4) 10 0.01 P6.5 retina GAACATTTCA (5) 8.3 0.0083 P6.5 retina GCAGCTTACA (10) 1.7 0.0017 P6.5 retina GTGTCTCTTC (10) 1.7 0.0017 P6.5 retina TAAGCCAAGG (3) 1.7 0.0017 P10.5 crx- retina TTTGCTTTAA (10) 31.6 0.0316 P10.5 crx- retina TGGATGCCTG (4) 9.3 0.0093 P10.5 crx- retina CAGACATCTC (6) 3.7 0.0037 P10.5 crx- retina GGGGCAGGGA (4) 3.7 0.0037 P10.5 crx- retina TTACAGACCC (2) 3.7 0.0037 P10.5 crx- retina AGGAGATGGG (6) 1.9 0.0019 P10.5 crx- retina GAACATTTCA (5) 1.9 0.0019 P10.5 crx- retina GCAGCTTACA (10) 1.9 0.0019 P10.5 crx- retina TCTCTCCCAG (3) 1.9 0.0019 P10.5 crx- retina TGCAACAATG (2) 1.9 0.0019 P10.5 crx+ retina TTTGCTTTAA (10) 28.8 0.0288 P10.5 crx+ retina GGGGCAGGGA (4) 13.5 0.0135 P10.5 crx+ retina GAACATTTCA (5) 9.6 0.0096 P10.5 crx+ retina GCAGCTTACA (10) 5.8 0.0058 P10.5 crx+ retina GAAGGCCGAC (2) 3.8 0.0038 P10.5 crx+ retina AGGCCTTGGC (5) 1.9 0.0019 P10.5 crx+ retina CAGCCGACTT (2) 1.9 0.0019 P10.5 crx+ retina CTCAGGAACT (4) 1.9 0.0019 P10.5 crx+ retina TGCAACAATG (2) 1.9 0.0019 P10.5 crx+ retina TGGATGCCTG (4) 1.9 0.0019 P10.5 crx+ retina TGGTGTAGTA (3) 1.9 0.0019 Adult retinal GGGGCAGGGA (4) 14.8 0.0148 Adult retinal TGGATGCCTG (4) 7.4 0.0074 Adult retinal TTTGCTTTAA (10) 7.4 0.0074 Adult retinal GTGTCTCTTC (10) 3.7 0.0037 Adult retinal AGGCCTTGGC (5) 1.9 0.0019 Adult retinal CAGACATCTC (6) 1.9 0.0019 Adult retinal TGGGATGGCT (5) 1.9 0.0019 Adult retinal TGGTGTAGTA (3) 1.9 0.0019 ONL TTTGCTTTAA (10) 15.3 0.0153 ONL GTGTCTCTTC (10) 11.5 0.0115 ONL GAACATTTCA (5) 3.8 0.0038 ONL GCAGCTTACA (10) 1.9 0.0019 ONL TGGGATGGCT (5) 1.9 0.0019