Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.282556	Npc2	Niemann Pick type C2	12		67963
Gene Ontology	extracellular space
Human Homolog	NPC2[Niemann-Pick disease, type C2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGTTTGCT (2) 3.3 0.0033 P8 Cb GC TAAGATTGAG 3.3 0.0033 P8 Cb GC GACGGAGTGG 1.6 0.0016 P8 Cb GC GCTTGTTTGC 1.6 0.0016 Cb medulloblastoma GCTGTTGCTG (2) 2.3 0.0023 Cb medulloblastoma GCTGTTTGCT (2) 2.3 0.0023 Cb medulloblastoma TAAGATTGAG 2.3 0.0023 P8 GC+1d culture GCTGTTTGCT (2) 16 0.016 P8 GC+1d culture TAAGATTGAG 9.1 0.0091 P8 GC+1d culture CAGAGAGAGG 1.1 0.0011 P8 GC+1d culture GACACCAATC (2) 1.1 0.0011 P8 GC+SHH+1d culture GCTGTTTGCT (2) 15.2 0.0152 P8 GC+SHH+1d culture TAAGATTGAG 12.9 0.0129 P8 GC+SHH+1d culture CAGAGAGAGG 2.3 0.0023 3T3 fibroblasts GCTGTTTGCT (2) 38.6 0.0386 3T3 fibroblasts GACACCAATC (2) 3.5 0.0035 E15 cortex TAAGATTGAG 9.9 0.0099 E15 cortex GACGGAGTGG 4.9 0.0049 E15 cortex GCTGTTTGCT (2) 4.9 0.0049 Hypothalamus GCTGTTTGCT (2) 5.4 0.0054 Hypothalamus TAAGATTGAG 3.6 0.0036 Hypothalamus CAGAGAGAGG 1.8 0.0018 E12.5 retina TAAGATTGAG 5.6 0.0056 E12.5 retina GCTTGTTTGC 1.9 0.0019 E14.5 retina TAAGATTGAG 5.5 0.0055 E14.5 retina GACACCAATC (2) 1.8 0.0018 E14.5 retina GACGGAGTGG 1.8 0.0018 E14.5 retina GCTGTTTGCT (2) 1.8 0.0018 E16.5 retina GCTGTTTGCT (2) 5.4 0.0054 E16.5 retina TAAGATTGAG 3.6 0.0036 E16.5 retina GACACCAATC (2) 1.8 0.0018 E16.5 retina GCTTGTTTGC 1.8 0.0018 E18.5 retina TAAGATTGAG 10.9 0.0109 P0.5 retina GCTGTTTGCT (2) 5.9 0.0059 P0.5 retina TAAGATTGAG 5.9 0.0059 P2.5 retina TAAGATTGAG 7 0.007 P2.5 retina CAGAGAGAGG 1.8 0.0018 P2.5 retina GACACCAATC (2) 1.8 0.0018 P4.5 retina TAAGATTGAG 5.9 0.0059 P4.5 retina GACACCAATC (2) 2 0.002 P6.5 retina GCTGTTGCTG (2) 1.7 0.0017 P6.5 retina TAAGATTGAG 1.7 0.0017 P10.5 crx- retina GCTGTTGCTG (2) 1.9 0.0019 P10.5 crx- retina TAAGATTGAG 1.9 0.0019 P10.5 crx+ retina CAGAGAGAGG 1.9 0.0019 P10.5 crx+ retina GCTGTTTGCT (2) 1.9 0.0019 Adult retinal GCTGTTGCTG (2) 1.9 0.0019 Adult retinal TAAGATTGAG 1.9 0.0019