Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.288682	Cpsf6	cleavage and polyadenylation specific factor 6	10		66698
Gene Ontology	nucleic acid binding
Human Homolog	CPSF6[cleavage and polyadenylation specific factor 6, 68kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

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SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCTTACA ACTAATTAAG GAGATCAAGA GATAAACTGA GCTCAAGGAA GTATTTATCT TGTTTACAAG TTTAATTCAC 34.2 0.0342 Cb medulloblastoma AATGTATAGC GGAGTAAATT GTATTTATCT TGTTTACAAG 9.2 0.0092 P8 GC+1d culture CTAGCCAGGT GAGATCAAGA GCTCAAGGAA GTATTTATCT TATGTCCACA TTTGCTTATG 13.6 0.0136 P8 GC+SHH+1d culture GATAAACTGA GCTCAAGGAA GTATTTATCT 3.6 0.0036 P1 cortex ACTAATTAAG GAGATCAAGA GCTCAAGGAA GTATTTATCT TTTGCTTATG 31.7 0.0317 Hypothalamus CTAGCCAGGT GGATGCAAAG TGTTTACAAG 5.4 0.0054 E12.5 retina ACTAATTAAG CTAGCCAGGT GATAAACTGA GCTCAAGGAA GTATTTATCT TGTTTACAAG 30.2 0.0302 E14.5 retina ACTAATTAAG GATAAACTGA GGAGTAAATT GTATTTATCT TATGTCCACA TTTAATTCAC 16.3 0.0163 E16.5 retina CTAGCCAGGT GATAAACTGA GGATGCAAAG GTATTTATCT TTTAATTCAC 16.3 0.0163 E18.5 retina ACTAATTAAG GATAAACTGA GTATTTATCT 14.5 0.0145 P0.5 retina AAGCCTTACA GATAAACTGA GTATTTATCT TTTGCTTATG 13.9 0.0139 P2.5 retina ACTAATTAAG GATAAACTGA GCTCAAGGAA GTATTTATCT TGTTTACAAG 28.2 0.0282 P4.5 retina AATGTATAGC ACTAATTAAG CTAGCCAGGT GCTCAAGGAA GTATTTATCT 19.9 0.0199 P6.5 retina GATAAACTGA GCTCAAGGAA GTATTTATCT TATGTCCACA TGTTATGCAA (2) TGTTTACAAG 28.3 0.0283 P10.5 crx- retina AAGCCTTACA ACTAATTAAG GTATTTATCT 9.4 0.0094 P10.5 crx+ retina ACTAATTAAG CTAGCCAGGT GATAAACTGA GTATTTATCT TGTTTACAAG 17.2 0.0172 Adult retinal GTATTTATCT TGTTATGCAA (2) TGTTTACAAG 7.5 0.0075 ONL CTAGCCAGGT GCTCAAGGAA GGAGTAAATT GGATGCAAAG GTATTTATCT 11.4 0.0114