Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290530	E430034L04Rik	RIKEN cDNA E430034L04 gene	5		23881
Gene Ontology	intracellular | mRNA processing | mRNA-nucleus export | nucleus | protein binding | protein transporter activity | protein-nucleus import | RNA binding | small GTPase mediated signal transduction | transport
Human Homolog	G3BP2[Ras-GTPase activating protein SH3 domain-binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 183 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAATAAAAA (28) 6.5 0.0065 P8 Cb GC AAGCAAATGA (7) 4.9 0.0049 P8 Cb GC CCCACTGAGT 3.3 0.0033 P8 Cb GC TGGTTGCTGA (15) 3.3 0.0033 P8 Cb GC TTTGAGGAAA (2) 3.3 0.0033 P8 Cb GC AAAATAAAAT (8) 1.6 0.0016 P8 Cb GC ATTCCGAATT (107) 1.6 0.0016 P8 Cb GC CCACCTCGTG (5) 1.6 0.0016 P8 Cb GC GTGACTGTTC (4) 1.6 0.0016 P8 Cb GC TGGGTCTGTG 1.6 0.0016 P8 Cb GC TGTGTATAAA (3) 1.6 0.0016 Cb medulloblastoma AAAATAAAAA (28) 9.2 0.0092 Cb medulloblastoma CCCACTGAGT 4.6 0.0046 Cb medulloblastoma TGTGTTTGAA (4) 4.6 0.0046 Cb medulloblastoma AATCCTTTAA (3) 2.3 0.0023 Cb medulloblastoma ATGGTGCCTT (2) 2.3 0.0023 Cb medulloblastoma GTGACTGTTC (4) 2.3 0.0023 Cb medulloblastoma TGGTTGCTGA (15) 2.3 0.0023 P8 GC+1d culture GTGACTGTTC (4) 9.1 0.0091 P8 GC+1d culture AAAATAAAAA (28) 8 0.008 P8 GC+1d culture TGTGTATAAA (3) 3.4 0.0034 P8 GC+1d culture AAGCAAATGA (7) 2.3 0.0023 P8 GC+1d culture ACACAGAAAC (8) 2.3 0.0023 P8 GC+1d culture GAGCCCTGGG (4) 1.1 0.0011 P8 GC+1d culture GGATGGTTAA (2) 1.1 0.0011 P8 GC+1d culture GGTGACTGTT (3) 1.1 0.0011 P8 GC+1d culture TTTGAGGAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAATAAAAA (28) 5.9 0.0059 P8 GC+SHH+1d culture CCCACTGAGT 3.5 0.0035 P8 GC+SHH+1d culture GTGACTGTTC (4) 3.5 0.0035 P8 GC+SHH+1d culture ATGGTGCCTT (2) 2.3 0.0023 P8 GC+SHH+1d culture TGGGTCTGTG 2.3 0.0023 P8 GC+SHH+1d culture TGGTTGCTGA (15) 2.3 0.0023 P8 GC+SHH+1d culture AAAATAAAAT (8) 1.2 0.0012 P8 GC+SHH+1d culture AATCCTTTAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGATGGTTAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGTTGGTGG (11) 1.2 0.0012 P8 GC+SHH+1d culture TGTGTATAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTGAGGAAA (2) 1.2 0.0012 3T3 fibroblasts ACACAGAAAC (8) 10.5 0.0105 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GGTGACTGTT (3) 7 0.007 3T3 fibroblasts TGGTTGCTGA (15) 7 0.007 3T3 fibroblasts ATGGTGCCTT (2) 3.5 0.0035 3T3 fibroblasts CCACCTCGTG (5) 3.5 0.0035 3T3 fibroblasts TGGTTGGTGG (11) 3.5 0.0035 3T3 fibroblasts TGTGTTTGAA (4) 3.5 0.0035 E15 cortex GGTGACTGTT (3) 34.6 0.0346 E15 cortex GTGACTGTTC (4) 14.8 0.0148 E15 cortex ATGGTGCCTT (2) 4.9 0.0049 E15 cortex CCCACTGAGT 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TGGTTGCTGA (15) 4.9 0.0049 E15 cortex TGGTTGGTGG (11) 4.9 0.0049 P1 cortex ACACAGAAAC (8) 22.7 0.0227 P1 cortex AAAATAAAAA (28) 9.1 0.0091 P1 cortex AATCCTTTAA (3) 9.1 0.0091 P1 cortex CCACCTCGTG (5) 4.5 0.0045 P1 cortex GAGCCCTGGG (4) 4.5 0.0045 P1 cortex TGGGTCTGTG 4.5 0.0045 P1 cortex TGGTTGGTGG (11) 4.5 0.0045 Hypothalamus AAAATAAAAA (28) 3.6 0.0036 Hypothalamus ACACAGAAAC (8) 3.6 0.0036 Hypothalamus AAGCAAATGA (7) 1.8 0.0018 Hypothalamus AATCTTTAAA 1.8 0.0018 Hypothalamus GAAAAGGGAG (7) 1.8 0.0018 Hypothalamus TGGTTGCTGA (15) 1.8 0.0018 Hypothalamus TGTGTATAAA (3) 1.8 0.0018 E12.5 retina AAAATAAAAA (28) 5.6 0.0056 E12.5 retina TGGGTCTGTG 5.6 0.0056 E12.5 retina TGTGTATAAA (3) 5.6 0.0056 E12.5 retina CCCACTGAGT 3.8 0.0038 E12.5 retina GGATGGTTAA (2) 3.8 0.0038 E12.5 retina AATCCTTTAA (3) 1.9 0.0019 E12.5 retina GAAAAGGGAG (7) 1.9 0.0019 E12.5 retina GAGCCCTGGG (4) 1.9 0.0019 E12.5 retina GGCTTGCTGG (3) 1.9 0.0019 E12.5 retina GTGACTGTTC (4) 1.9 0.0019 E12.5 retina TGGTTGCTGA (15) 1.9 0.0019 E12.5 retina TTTGAGGAAA (2) 1.9 0.0019 E14.5 retina TGGTTGCTGA (15) 21.9 0.0219 E14.5 retina AAAATAAAAA (28) 14.6 0.0146 E14.5 retina ATGGTGCCTT (2) 3.6 0.0036 E14.5 retina TGGTTGGTGG (11) 3.6 0.0036 E14.5 retina TGTGTATAAA (3) 3.6 0.0036 E14.5 retina AATCCTTTAA (3) 1.8 0.0018 E14.5 retina CCACCTCGTG (5) 1.8 0.0018 E14.5 retina CCCACTGAGT 1.8 0.0018 E14.5 retina TTTGAGGAAA (2) 1.8 0.0018 E16.5 retina TGGTTGCTGA (15) 19.9 0.0199 E16.5 retina AAAATAAAAA (28) 10.9 0.0109 E16.5 retina GTGACTGTTC (4) 5.4 0.0054 E16.5 retina CCCACTGAGT 3.6 0.0036 E16.5 retina TGTGTATAAA (3) 3.6 0.0036 E16.5 retina AAGCAAATGA (7) 1.8 0.0018 E16.5 retina AATCTTTAAA 1.8 0.0018 E16.5 retina TGGTTGGTGG (11) 1.8 0.0018 E16.5 retina TTTGAGGAAA (2) 1.8 0.0018 E18.5 retina AAAATAAAAA (28) 16.4 0.0164 E18.5 retina TGTGTATAAA (3) 10.9 0.0109 E18.5 retina TGGGTCTGTG 5.5 0.0055 E18.5 retina GTGACTGTTC (4) 1.8 0.0018 E18.5 retina TGGTTGCTGA (15) 1.8 0.0018 P0.5 retina AAAATAAAAA (28) 5.9 0.0059 P0.5 retina GTGACTGTTC (4) 5.9 0.0059 P0.5 retina AAGCAAATGA (7) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TGTGTATAAA (3) 3.9 0.0039 P0.5 retina TGGGTCTGTG 2 0.002 P0.5 retina TGGTTGCTGA (15) 2 0.002 P0.5 retina TGGTTGGTGG (11) 2 0.002 P0.5 retina TTTGAAGAAT (4) 2 0.002 P2.5 retina AAAATAAAAA (28) 19.4 0.0194 P2.5 retina TGTGTATAAA (3) 7 0.007 P2.5 retina TGGGTCTGTG 3.5 0.0035 P2.5 retina ACACAGAAAC (8) 1.8 0.0018 P2.5 retina CCCACTGAGT 1.8 0.0018 P2.5 retina GGATGGTTAA (2) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTGACTGTTC (4) 1.8 0.0018 P2.5 retina TGGTTGCTGA (15) 1.8 0.0018 P4.5 retina AAAATAAAAA (28) 21.8 0.0218 P4.5 retina TGTGTATAAA (3) 11.9 0.0119 P4.5 retina TGGGTCTGTG 5.9 0.0059 P4.5 retina TGGTTGCTGA (15) 5.9 0.0059 P4.5 retina TGGTTGGTGG (11) 5.9 0.0059 P4.5 retina GTGACTGTTC (4) 4 0.004 P4.5 retina AATCCTTTAA (3) 2 0.002 P4.5 retina AATCTTTAAA 2 0.002 P4.5 retina ATGGTGCCTT (2) 2 0.002 P4.5 retina ATTCCGAATT (107) 2 0.002 P4.5 retina CCCACTGAGT 2 0.002 P4.5 retina GAGCCCTGGG (4) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina AAAATAAAAA (28) 11.7 0.0117 P6.5 retina TGGTTGCTGA (15) 8.3 0.0083 P6.5 retina GGCTTGCTGG (3) 5 0.005 P6.5 retina GTGACTGTTC (4) 5 0.005 P6.5 retina TGGTTGGTGG (11) 5 0.005 P6.5 retina AATCCTTTAA (3) 3.3 0.0033 P6.5 retina ATTCCGAATT (107) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TTTGAAGAAT (4) 3.3 0.0033 P6.5 retina AATCTTTAAA 1.7 0.0017 P6.5 retina GGTGACTGTT (3) 1.7 0.0017 P6.5 retina TGGGTCTGTG 1.7 0.0017 P10.5 crx- retina GTGACTGTTC (4) 13 0.013 P10.5 crx- retina AAAATAAAAA (28) 3.7 0.0037 P10.5 crx- retina TGGGTCTGTG 1.9 0.0019 P10.5 crx- retina TGGTTGCTGA (15) 1.9 0.0019 P10.5 crx- retina TTTGAGGAAA (2) 1.9 0.0019 P10.5 crx+ retina AATCCTTTAA (3) 3.8 0.0038 P10.5 crx+ retina TGGTTGCTGA (15) 3.8 0.0038 P10.5 crx+ retina TTTGAGGAAA (2) 3.8 0.0038 P10.5 crx+ retina AAAATAAAAA (28) 1.9 0.0019 P10.5 crx+ retina GAGCCCTGGG (4) 1.9 0.0019 P10.5 crx+ retina GGATGGTTAA (2) 1.9 0.0019 P10.5 crx+ retina GTGACTGTTC (4) 1.9 0.0019 P10.5 crx+ retina TGGGTCTGTG 1.9 0.0019 P10.5 crx+ retina TGTGTATAAA (3) 1.9 0.0019 Adult retinal GTGACTGTTC (4) 7.4 0.0074 Adult retinal AAGCAAATGA (7) 5.6 0.0056 Adult retinal AAAATAAAAA (28) 1.9 0.0019 Adult retinal GGCTTGCTGG (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TGGGTCTGTG 1.9 0.0019 Adult retinal TGGTTGCTGA (15) 1.9 0.0019 Adult retinal TGGTTGGTGG (11) 1.9 0.0019 Adult retinal TGTGTATAAA (3) 1.9 0.0019 ONL AAAATAAAAA (28) 11.5 0.0115 ONL TGGTTGCTGA (15) 11.5 0.0115 ONL GGCTTGCTGG (3) 5.7 0.0057 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AAAATAAAAT (8) 3.8 0.0038 ONL ATTCCGAATT (107) 3.8 0.0038 ONL TGGTTGGTGG (11) 3.8 0.0038 ONL TTTGAGGAAA (2) 3.8 0.0038 ONL AAGCAAATGA (7) 1.9 0.0019 ONL AATCCTTTAA (3) 1.9 0.0019 ONL GAGCCCTGGG (4) 1.9 0.0019 ONL GTGACTGTTC (4) 1.9 0.0019 ONL TGTGTATAAA (3) 1.9 0.0019 ONL TTTGAAGAAT (4) 1.9 0.0019