| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGGCCTTGGC (2) GCCGAGCAGA GGATGCTGGG GGCCTTGCTG (2)
| 39.1 | 0.0391 |
| Cb medulloblastoma | AGGCCTTGGC (2) GCCGAGCAGA GGATGCTGGG
| 23.1 | 0.0231 |
| P8 GC+1d culture | GCCGAGCAGA GCCTTTGCTT GGATGCTGGG TGCGAGCAGA
| 33 | 0.033 |
| P8 GC+SHH+1d culture | GGATGCTGGG TGCGAGCAGA
| 36.3 | 0.0363 |
| 3T3 fibroblasts | GGATGCTGGG TGCGAGCAGA
| 21 | 0.021 |
| E15 cortex | GGATGCTGGG
| 74.2 | 0.0742 |
| P1 cortex | GGATGCTGGG
| 9.1 | 0.0091 |
| Hypothalamus | AGGCCTTGGC (2) GCCGAGCAGA GGATGCTGGG
| 10.8 | 0.0108 |
| E12.5 retina | GGATGCTGGG
| 45.1 | 0.0451 |
| E14.5 retina | GGATGCTGGG
| 18.2 | 0.0182 |
| E16.5 retina | AGGCCTTGGC (2) GCCGAGCAGA GGATGCTGGG TCCACCGTCT
| 25.3 | 0.0253 |
| E18.5 retina | GGATGCTGGG
| 40 | 0.04 |
| P0.5 retina | AGGCCTTGGC (2) GCCGAGCAGA GGATGCTGGG TCCACCGTCT
| 31.5 | 0.0315 |
| P2.5 retina | GCCGAGCAGA GGATGCTGGG
| 45.7 | 0.0457 |
| P4.5 retina | GCCTTTGCTT GGATGCTGGG
| 27.8 | 0.0278 |
| P6.5 retina | GGATGCTGGG GGCCTTGCTG (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | GGATGCTGGG
| 26 | 0.026 |
| P10.5 crx+ retina | AGGCCTTGGC (2) GCCGAGCAGA GCCTTTGCTT GGATGCTGGG
| 34.5 | 0.0345 |
| Adult retinal | AGGCCTTGGC (2) GCCGAGCAGA GGATGCTGGG GGCCTTGCTG (2)
| 29.8 | 0.0298 |
| ONL | GGATGCTGGG TCCACCGTCT
| 5.7 | 0.0057 |