Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.291928	Catnb	catenin beta	9	9 F4 (9 72.0 cM)	12387
Gene Ontology	adherens junction | alpha-catenin binding | apical part of cell | basolateral plasma membrane | cadherin binding | cell adhesion | cell growth and/or maintenance | cell-cell adherens junction | cytoplasm | cytoskeleton | DNA binding | ectoderm development | gastrulation (sensu Mammalia) | heart development | hemopoiesis | intercellular junction | lamellipodium | lung development | membrane | membrane fraction | nucleus | patterning of blood vessels | protein binding | proximal/distal pattern formation | regulation of cell differentiation | regulation of cell proliferation | regulation of transcription | regulation of transcription, DNA-dependent | structural molecule activity | synapse organization and biogenesis | synaptic transmission | transcription | transcription coactivator activity | transcription factor activity | transcription factor complex | Wnt receptor signaling pathway
Human Homolog	CTNNB1[catenin (cadherin-associated protein), beta 1, 88kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 44 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTGAACA 13.1 0.0131 P8 Cb GC AAATAGATCC 1.6 0.0016 P8 Cb GC GATGGGCTGC 1.6 0.0016 Cb medulloblastoma TTTTTGAACA 11.6 0.0116 Cb medulloblastoma AAATAGATCC 2.3 0.0023 P8 GC+1d culture TTTTTGAACA 18.3 0.0183 P8 GC+1d culture TGTGGAAGTT (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTTTGAACA 14.1 0.0141 P8 GC+SHH+1d culture AAATAGATCC 3.5 0.0035 P8 GC+SHH+1d culture TGTGGAAGTT (2) 1.2 0.0012 3T3 fibroblasts AAATAGATCC 3.5 0.0035 3T3 fibroblasts TTTTTGAACA 3.5 0.0035 E15 cortex GATGGGCTGC 4.9 0.0049 P1 cortex TTTTTGAACA 9.1 0.0091 Hypothalamus TTTTTGAACA 12.7 0.0127 Hypothalamus AAATAGATCC 1.8 0.0018 Hypothalamus TGTGGAAGTT (2) 1.8 0.0018 E12.5 retina TTTTTGAACA 26.3 0.0263 E12.5 retina AAATAGATCC 15 0.015 E14.5 retina TTTTTGAACA 21.9 0.0219 E14.5 retina AAATAGATCC 1.8 0.0018 E16.5 retina TTTTTGAACA 9.1 0.0091 E16.5 retina AAATAGATCC 3.6 0.0036 E16.5 retina GATGGGCTGC 3.6 0.0036 E16.5 retina TGTGGAAGTT (2) 1.8 0.0018 E18.5 retina TTTTTGAACA 14.6 0.0146 E18.5 retina AAATAGATCC 5.5 0.0055 E18.5 retina GATGGGCTGC 1.8 0.0018 P0.5 retina TTTTTGAACA 23.6 0.0236 P0.5 retina TGTGGAAGTT (2) 5.9 0.0059 P0.5 retina AAATAGATCC 2 0.002 P2.5 retina TTTTTGAACA 19.4 0.0194 P2.5 retina AAATAGATCC 8.8 0.0088 P4.5 retina TTTTTGAACA 7.9 0.0079 P4.5 retina AAATAGATCC 4 0.004 P6.5 retina TTTTTGAACA 11.7 0.0117 P6.5 retina AAATAGATCC 3.3 0.0033 P10.5 crx- retina TTTTTGAACA 16.7 0.0167 P10.5 crx+ retina TTTTTGAACA 9.6 0.0096 P10.5 crx+ retina AAATAGATCC 7.7 0.0077 P10.5 crx+ retina TGTGGAAGTT (2) 3.8 0.0038 Adult retinal TTTTTGAACA 5.6 0.0056 ONL TGTGGAAGTT (2) 3.8 0.0038 ONL TTTTTGAACA 3.8 0.0038