Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29324	Ldh1	lactate dehydrogenase 1, A chain	7	7 23.5 cM	16828
Gene Ontology	glycolysis | L-lactate dehydrogenase activity | oxidoreductase activity
Human Homolog	LDHA[lactate dehydrogenase A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAAATAAAA CCCATTTCCC GCAAATAAAA (3) GCAGCCCTCT (2) 27.7 0.0277 Cb medulloblastoma CCAAATAAAA GACGTACACA (3) GCAAATAAAA (3) GCAGCCCTCT (2) GCTTGTGCCA (2) TGCCTGTGTG 30 0.03 P8 GC+1d culture ATGCATATCT CCAAATAAAA CCCATTTCCC GCAAATAAAA (3) 31.9 0.0319 P8 GC+SHH+1d culture CCAAATAAAA CCCATTTCCC GCAAATAAAA (3) 50.3 0.0503 3T3 fibroblasts CCAAATAAAA GCGACTCCAG 14 0.014 E15 cortex CCAAATAAAA 29.7 0.0297 P1 cortex CCAAATAAAA GCTTGTGCCA (2) TGCCTGTGTG 27.2 0.0272 Hypothalamus CCAAATAAAA GACGTACACA (3) GCAAATAAAA (3) 18.1 0.0181 E12.5 retina CCAAATAAAA GACGTACACA (3) GCAGCCTCTT (3) 120.2 0.1202 E14.5 retina CCAAAATAAA (2) CCAAATAAAA CCCATTTCCC GCAGCCCTCT (2) GCAGCCTCTT (3) GCTTGTGCCA (2) TATCCTGGGA TTTGGTGCAG 87.3 0.0873 E16.5 retina ATGCATATCT CCAAAATAAA (2) CCAAATAAAA GCAGCCCTCT (2) TATCCTGGGA TTTGGTGCAG 173.9 0.1739 E18.5 retina ATGCATATCT CCAAATAAAA 247.4 0.2474 P0.5 retina CCAAATAAAA CCCATTTCCC TTTGGTGCAG 43.3 0.0433 P2.5 retina CCAAAATAAA (2) CCAAATAAAA CCCATTTCCC GCAAATAAAA (3) TTTGGTGCAG 169 0.169 P4.5 retina ATGCATATCT CCAAAATAAA (2) CCAAATAAAA GCAAATAAAA (3) GCAGCCTCTT (3) TGCCTGTGTG 255.6 0.2556 P6.5 retina ATGCATATCT CCAAAATAAA (2) CCAAATAAAA GCAGCCTCTT (3) TGCCTGTGTG TTTGGTGCAG 190.1 0.1901 P10.5 crx- retina ATGCATATCT CCAAATAAAA GCAGCCTCTT (3) GCGACTCCAG TATCCTGGGA TTTGGTGCAG 171.1 0.1711 P10.5 crx+ retina CCAAAATAAA (2) CCAAATAAAA GCAGCCCTCT (2) GCGACTCCCA TTTGGTGCAG 226.8 0.2268 Adult retinal ATGCATATCT CCAAATAAAA GCAGCCCTCT (2) GCGACTCCAG TGCCTGTGTG 94.5 0.0945 ONL ATGCATATCT CCAAATAAAA GCGACTCCCA TTTGGTGCAG 68.9 0.0689