Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.296158	1300006C19Rik	RIKEN cDNA 1300006C19 gene	9		68292
Gene Ontology	biological_process unknown | cellular_component unknown | transferase activity
Human Homolog	SIMP[source of immunodominant MHC-associated peptides]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATCTGCTC GAGTGGCAGG (2) TCCTGTTTCA TGTTTGTGTT (3) 8.1 0.0081 Cb medulloblastoma AGGGAAATAA (3) AGGGAATAAG 4.6 0.0046 P8 GC+1d culture GAACTGTAAA TTTTTATACC 4.6 0.0046 P8 GC+SHH+1d culture AGGGAAATAA (3) AGGGAATAAG CGTACCTGTC GAATCTGCTC TCCTGTTTCA TGCCAGGGAC 17.5 0.0175 3T3 fibroblasts GAATCTGCTC TGCCAGGGAC 7 0.007 P1 cortex TTTTTATACC 4.5 0.0045 Hypothalamus GAACTGTAAA 1.8 0.0018 E12.5 retina AGGGAAATAA (3) GAACTGTAAA GAATCTGCTC TGCCAGGGAC TTTTTATACC 13.2 0.0132 E14.5 retina AGGGAAATAA (3) GAACTGTAAA GAGTGGCAGG (2) TCCTGTTTCA TTTTTATACC 12.7 0.0127 E16.5 retina GAGTGGCAGG (2) 1.8 0.0018 E18.5 retina AGGGAAATAA (3) CGTACCTGTC TCCTGTTTCA 7.2 0.0072 P0.5 retina AGGGAAATAA (3) GAACTGTAAA TCCTGTTTCA TGTTTGTGTT (3) 8 0.008 P2.5 retina AGGGAAATAA (3) CGTACCTGTC GAACTGTAAA TCCTGTTTCA TGCCAGGGAC 15.9 0.0159 P4.5 retina AGGGAAATAA (3) GAACTGTAAA TCCTGTTTCA TGCCAGGGAC 17.8 0.0178 P6.5 retina AGGGAAATAA (3) TTTTTATACC 3.4 0.0034 P10.5 crx- retina AGGGAAATAA (3) 3.7 0.0037 P10.5 crx+ retina GAACTGTAAA GAATCTGCTC GAGTGGCAGG (2) 5.7 0.0057 Adult retinal CGTACCTGTC TGCCAGGGAC TTTTTATACC 5.7 0.0057 ONL AGGGAAATAA (3) TGTTTGTGTT (3) 3.8 0.0038