Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.296366
Rai1
retinoic acid induced 1
11
19377
Gene Ontology
DNA binding
|
regulation of transcription, DNA-dependent
Human Homolog
RAI1[retinoic acid induced 1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTCGCTTCTG
(
2
)
TAAAATAAAA
(
2
)
TGCCAATGAC
11.4
0.0114
Cb medulloblastoma
TAAAATAAAA
(
2
)
18.5
0.0185
P8 GC+1d culture
TAAAATAAAA
(
2
)
12.6
0.0126
P8 GC+SHH+1d culture
CTCGCTTCTG
(
2
)
TAAAATAAAA
(
2
)
TGCCAATGAC
11.7
0.0117
3T3 fibroblasts
CTCGCTTCTG
(
2
)
3.5
0.0035
P1 cortex
TAAAATAAAA
(
2
)
13.6
0.0136
Hypothalamus
TAAAATAAAA
(
2
)
12.7
0.0127
E12.5 retina
CTCGCTTCTG
(
2
)
TAAAATAAAA
(
2
)
13.2
0.0132
E14.5 retina
CTCGCTTCTG
(
2
)
GGATTCAGGG
TAAAATAAAA
(
2
)
TGCCAATGAC
9
0.009
E16.5 retina
TAAAATAAAA
(
2
)
5.4
0.0054
E18.5 retina
TAAAATAAAA
(
2
)
14.6
0.0146
P0.5 retina
CTCGCTTCTG
(
2
)
TAAAATAAAA
(
2
)
5.9
0.0059
P2.5 retina
CTCGCTTCTG
(
2
)
TAAAATAAAA
(
2
)
10.6
0.0106
P4.5 retina
GGATTCAGGG
TAAAATAAAA
(
2
)
29.7
0.0297
P6.5 retina
CTCGCTTCTG
(
2
)
TAAAATAAAA
(
2
)
13.4
0.0134
P10.5 crx- retina
TAAAATAAAA
(
2
)
5.6
0.0056
P10.5 crx+ retina
GGATTCAGGG
TAAAATAAAA
(
2
)
3.8
0.0038
ONL
TAAAATAAAA
(
2
)
7.7
0.0077
