Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297	Actb	actin, beta, cytoplasmic	5	5 80.0 cM	11461
Gene Ontology	actin cytoskeleton | actin filament | cytoskeleton | cytoskeleton organization and biogenesis | motor activity | structural constituent of cytoskeleton | structural molecule activity
Human Homolog	ACTB[actin, beta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 188 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAGTGG (3) AAATGGTGAC AACATAATTA AAGATCAAGG (2) AAGATCCTGA (2) AAGTGTGACG (3) AGATCTGACG CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GATGCCACAG (4) GCTTTGTTTT (2) GTGCTAGGAA GTGCTAGGAG (2) GTGGTACCAG TACGTAGCCA TGCAAAGCCG (2) TTTGAGACCT (2) 339.3 0.3393 Cb medulloblastoma AAAACTACAT (3) AAATAAGTGG (3) AAGATCCTGA (2) CCCTGAGTCC GAGAAGATCT (2) GATACTTGGA GCTTTGTTTT (2) GTGGTACAGG GTGGTACCGC 64.6 0.0646 P8 GC+1d culture AAATAAGTGG (3) AGATCTGACG CCCTGAGTCC GACGCGACCA GATACTTGGA GCTTTGTTTT (2) GGCAGGGGTG (2) GTGGTACAGG GTGGTACCAG 207.6 0.2076 P8 GC+SHH+1d culture AAATAAGTGG (3) AACATAATTA AAGATCCTGA (2) AGATCTGACG AGCCTGGCGG CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GCTTTGTTTT (2) GTGGTACCAG 243.6 0.2436 3T3 fibroblasts AAGATCCTGA (2) AAGTGTGACG (3) CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GCTTTGTTTT (2) GGGAAAGCCC (2) GTGGTACCAG TGTACTGTAT 539.7 0.5397 E15 cortex AAATAAGTGG (3) AAGATCAAGG (2) AAGATCCTGA (2) AAGTGTGACG (3) AGATCTGACG AGCCTGGCGG CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GCCAAGATCT GCTTTGTTTT (2) GGCAGGGGTG (2) GGGAAAGCCC (2) 395.4 0.3954 P1 cortex AAGATCAAGG (2) AGCCTGGCGG CCCTGAGTCC GACGCGACCA GATACTTGGA GCCAAGATCT GCTTTGTTTT (2) GTGGTACCAG TGTACTGTAT 777 0.777 Hypothalamus AAGATCCTGA (2) CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GATGCCACAG (4) GCTTTGTTTT (2) GGCAGGGGTG (2) 34.3 0.0343 E12.5 retina AAGATCAAGG (2) CCCTGAGTCC GACGCGACCA GATACTTGGA GCTTTGTTTT (2) GTGGTACCAG TACGTAGCCA 204.7 0.2047 E14.5 retina AAATAAGTGG (3) AAATGGTGAC AAGATCCTGA (2) AAGTGTGACG (3) AGCCTGGCGG CCCTGAGTCC GACGCGACCA GATACTTGGA GCCAAGATCT GCTTTGTTTT (2) GGCAGGGGTG (2) GTGGTACAGG TACGTAGCCA 58.1 0.0581 E16.5 retina AAATAAGTGG (3) AAATGGTGAC CCCTGAGTCC GACGCGACCA GATACTTGGA GCCAAGATCT GCTTTGTTTT (2) GTGCTAGGAG (2) GTGGTACCAG TACGTAGCCA 56.1 0.0561 E18.5 retina AAATAAGTGG (3) AAATGGTGAC CCCTGAGTCC GACGCGACCA GATACTTGGA GCTTTGTTTT (2) GTGGTACCAG 85.5 0.0855 P0.5 retina AAATAAGTGG (3) CCCTGAGTCC GACGCGACCA GATACTTGGA GCTTTGTTTT (2) GTGGTACCAG TGTACTGTAT 115.8 0.1158 P2.5 retina AGCCTGGCGG CCCTGAGTCC GACGCGACCA GATACTTGGA GCCAAGATCT GCTTTGTTTT (2) GGCAGGGGTG (2) GTGCTAGGAA GTGCTAGGAG (2) GTGGTACCAG 130.4 0.1304 P4.5 retina AGCCTGGCGG CCCTGAGTCC GACGCGACCA GATACTTGGA GCTTTGTTTT (2) GGGAAAGCCC (2) GTGCTAGGAG (2) 89.3 0.0893 P6.5 retina AGCCTGGCGG CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GATGCCACAG (4) GCTTTGTTTT (2) GTGCTAGGAG (2) GTGGTACCAG TGTACTGTAT 126.6 0.1266 P10.5 crx- retina CCCTGAGTCC GATACTTGGA GCTTTGTTTT (2) GGCAGGGGTG (2) GTGCTAGGAG (2) GTGGTACCAG 39.2 0.0392 P10.5 crx+ retina CCCTGAGTCC GACGCGACCA GAGAAGATCT (2) GATACTTGGA GCCAAGATCT GCTTTGTTTT (2) GGCAGGGGTG (2) GTGCTAGGAG (2) 67.3 0.0673 Adult retinal AAAACTACAT (3) CCCTGAGTCC GATACTTGGA GCTTTGTTTT (2) GGCAGGGGTG (2) GTGCTAGGAA GTGCTAGGAG (2) TTTGAGACCT (2) 59.4 0.0594 ONL CCCTGAGTCC GATACTTGGA GCTTTGTTTT (2) GTGCTAGGAG (2) GTGGTACAGG GTGGTACCGC 43.9 0.0439