Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29855	Ptprf	protein tyrosine phosphatase, receptor type, F	4		19268
Gene Ontology	cell adhesion | extracellular space | hydrolase activity | integral to membrane | integral to plasma membrane | phosphoprotein phosphatase activity | plasma membrane | prenylated protein tyrosine phosphatase activity | protein amino acid dephosphorylation | protein binding | protein-tyrosine-phosphatase activity | receptor activity | transmembrane receptor protein tyrosine phosphatase activity | transmembrane receptor protein tyrosine phosphatase signaling pathway
Human Homolog	PTPRF[protein tyrosine phosphatase, receptor type, F]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCCAGTATA GGGTGGGAAG (3) TCTGTGGTTG 9.7 0.0097 P8 GC+1d culture GCGAGCCCCA GGGTGGGAAA GGGTGGGAAG (3) GTACTATACT 20.6 0.0206 P8 GC+SHH+1d culture CCTCAAGTGC (3) GGGTGGGAAA GGGTGGGAAG (3) GTACTATACT 23.4 0.0234 3T3 fibroblasts GGGTGGGAAG (3) GTGGTGCATT 31.5 0.0315 E15 cortex GGGTGGGAAA GGGTGGGAAG (3) GTACTATACT GTGGTGCATT 44.4 0.0444 P1 cortex GGGTGGGAAG (3) 4.5 0.0045 Hypothalamus GGGTGGGAAG (3) 3.6 0.0036 E12.5 retina CCTCAAGTGC (3) GCGAGCCCCA GGGTGGGAAA GGGTGGGAAG (3) GTACTATACT 32.1 0.0321 E14.5 retina CCCCAGTATA CCTCAAGTGC (3) GCGAGCCCCA GGCCCACAGA GGGTGGGAAG (3) GTACTATACT TCTGTGGTTG 29 0.029 E16.5 retina GGCCCACAGA GGGTGGGAAG (3) GTACTATACT 25.3 0.0253 E18.5 retina GCGAGCCCCA GGGTGGGAAG (3) GTACTATACT 12.7 0.0127 P0.5 retina GCGAGCCCCA GGGTGGGAAA GGGTGGGAAG (3) GTACTATACT 31.5 0.0315 P2.5 retina CCTCAAGTGC (3) GCGAGCCCCA GGGTGGGAAA GGGTGGGAAG (3) TCTGTGGTTG 42.3 0.0423 P4.5 retina CCCCAGTATA GCGAGCCCCA GGGTGGGAAG (3) 21.8 0.0218 P6.5 retina GGGTGGGAAA GGGTGGGAAG (3) 28.3 0.0283 P10.5 crx- retina CCCCAGTATA GGCCCACAGA GGGTGGGAAG (3) GTACTATACT 13.1 0.0131 P10.5 crx+ retina GCGAGCCCCA GGGTGGGAAG (3) 13.4 0.0134 Adult retinal CCTCAAGTGC (3) GCGAGCCCCA GGGTGGGAAA GGGTGGGAAG (3) GTACTATACT 15 0.015 ONL GGGTGGGAAG (3) GTGGTGCATT 7.6 0.0076