Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30478	Rpl39	ribosomal protein L39	X		67248
Gene Ontology	cytosolic large ribosomal subunit (sensu Eukarya) | intracellular | protein biosynthesis | ribosome | RNA binding | structural constituent of ribosome
Human Homolog	RPL39[ribosomal protein L39]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTCTCACA 32.6 0.0326 P8 Cb GC GCGAGAAGCC 11.4 0.0114 P8 Cb GC TCTTTTTCAC 1.6 0.0016 Cb medulloblastoma TCTTCTCACA 13.9 0.0139 Cb medulloblastoma GCGAGAAGCC 2.3 0.0023 P8 GC+1d culture TCTTCTCACA 27.4 0.0274 P8 GC+1d culture GCGAGAAGCC 10.3 0.0103 P8 GC+SHH+1d culture TCTTCTCACA 17.6 0.0176 P8 GC+SHH+1d culture GCGAGAAGCC 8.2 0.0082 P8 GC+SHH+1d culture GCGGGGGCCA 1.2 0.0012 3T3 fibroblasts TCTTCTCACA 38.6 0.0386 3T3 fibroblasts GCGAGAAGCC 14 0.014 E15 cortex TCTTCTCACA 24.7 0.0247 E15 cortex CGTCCTTTTT 4.9 0.0049 P1 cortex TCTTCTCACA 45.5 0.0455 P1 cortex GCGAGAAGCC 4.5 0.0045 Hypothalamus GCGAGAAGCC 7.2 0.0072 Hypothalamus TCTTCTCACA 5.4 0.0054 Hypothalamus CGTCCTTTTT 3.6 0.0036 Hypothalamus GCGGGGGCCA 1.8 0.0018 E12.5 retina TCTTCTCACA 33.8 0.0338 E12.5 retina GCGAGAAGCC 31.9 0.0319 E14.5 retina GCGAGAAGCC 9.1 0.0091 E16.5 retina GCGAGAAGCC 7.2 0.0072 E16.5 retina TCTTCTCACA 1.8 0.0018 E18.5 retina GCGAGAAGCC 16.4 0.0164 E18.5 retina TCTTCTCACA 7.3 0.0073 P0.5 retina TCTTCTCACA 35.3 0.0353 P0.5 retina GCGAGAAGCC 23.6 0.0236 P2.5 retina TCTTCTCACA 15.8 0.0158 P2.5 retina GCGAGAAGCC 5.3 0.0053 P2.5 retina GCGGGGGCCA 1.8 0.0018 P4.5 retina TCTTCTCACA 17.8 0.0178 P4.5 retina GCGAGAAGCC 4 0.004 P6.5 retina TCTTCTCACA 8.3 0.0083 P6.5 retina GCGAGAAGCC 3.3 0.0033 P6.5 retina GCGGGGGCCA 1.7 0.0017 P10.5 crx- retina GCGAGAAGCC 3.7 0.0037 P10.5 crx- retina TCTTCTCACA 1.9 0.0019 P10.5 crx+ retina TCTTCTCACA 23.1 0.0231 P10.5 crx+ retina GCGAGAAGCC 21.1 0.0211 Adult retinal TCTTCTCACA 18.5 0.0185 Adult retinal GCGAGAAGCC 1.9 0.0019 Adult retinal GCGGGGGCCA 1.9 0.0019 ONL TCTTCTCACA 17.2 0.0172 ONL GCGAGAAGCC 5.7 0.0057 ONL TCTTTTTCAC 3.8 0.0038