Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.305750	Rpl27a	ribosomal protein L27a	7	7 51.55 cM	26451
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL27A[ribosomal protein L27a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 122 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACCACCACA CCTACCTGCA (3) CCTCCAGCAT CGGCAAAAAA (2) GAAAACTTAA (2) GCGGTGGCAG TTGGAAATCT (4) 91.4 0.0914 Cb medulloblastoma CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGCAAAAAA (3) 48.4 0.0484 P8 GC+1d culture CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GCGGTGGCAG TGGTCTTTGC 70.6 0.0706 P8 GC+SHH+1d culture CACCACCACA CCTACCTGCA (3) CCTCCAGCAT CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGCAAAAAA (3) 58.5 0.0585 3T3 fibroblasts CACCACCACA CCTACCTGCA (3) CCTCCAGCAT GCGGTGGCAG 301.4 0.3014 E15 cortex CACCACCACA CGGCAAAAAA (2) 39.5 0.0395 P1 cortex CACCACCACA CCTACCTGCA (3) GAAAATGTTA 36.3 0.0363 Hypothalamus CACCACCACA CCTACCTGCA (3) CCTCCAGCAT CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGCAAAAAA (3) TTGGAAATCT (4) 52.4 0.0524 E12.5 retina CACCACCACA CCTACCTGCA (3) CCTCCAGCAT CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGTCTTTGC TTGGAAATCT (4) 80.8 0.0808 E14.5 retina CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG 34.7 0.0347 E16.5 retina CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGCAAAAAA (3) TTGGAAATCT (4) 54.3 0.0543 E18.5 retina CACCACCACA CCTACCTGCA (3) CCTCCAGCAT CGGCAAAAAA (2) GAAAACTTAA (2) GCGGTGGCAG TGGCAAAAAA (3) TGGTCTTTGC TTGGAAATCT (4) 74.5 0.0745 P0.5 retina CACCACCACA CCTACCTGCA (3) CCTCCAGCAT CGGCAAAAAA (2) GAAAACTTAA (2) GCGGTGGCAG TGGCAAAAAA (3) 76.5 0.0765 P2.5 retina CACCACCACA CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGCAAAAAA (3) 44 0.044 P4.5 retina CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGCAAAAAA (3) 59.5 0.0595 P6.5 retina CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAACTTAA (2) GCGGTGGCAG TTGGAAATCT (4) 48.4 0.0484 P10.5 crx- retina CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAATGTTA TTGGAAATCT (4) 26.1 0.0261 P10.5 crx+ retina CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GAAAACTTAA (2) GAAAATGTTA GCGGTGGCAG TGGTCTTTGC 38.4 0.0384 Adult retinal CACCACCACA CCTACCTGCA (3) CGGCAAAAAA (2) GCGGTGGCAG 20.5 0.0205 ONL CACCACCACA GCGGTGGCAG TGGCAAAAAA (3) 26.8 0.0268