Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.315962	Pgam1	phosphoglycerate mutase 1	19	19 10.0 cM	18648
Gene Ontology	bisphosphoglycerate mutase activity | bisphosphoglycerate phosphatase activity | catalytic activity | cytosol | glycolysis | hydrolase activity | intramolecular transferase activity, phosphotransferases | isomerase activity | metabolism | phosphoglycerate mutase activity
Human Homolog	PGAM1[phosphoglycerate mutase 1 (brain)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTTCTGGG (2) CTCCAGCTGC TTCCAGCTGC 27.7 0.0277 Cb medulloblastoma CAGTTCTGGG (2) GTGATTTTTA TCAGAGTTTT TTCCAGCTGC 80.9 0.0809 P8 GC+1d culture CTCCAGCTGC TTCCAGCTGC 26.2 0.0262 P8 GC+SHH+1d culture ATCCAGGGGT TTCCAGCTGC 43.4 0.0434 3T3 fibroblasts AGGTTACTTC CTCCAGCTGC GAGCCTGATC TTCCAGCTGC 63.1 0.0631 E15 cortex GAAGCTGAAC TTCCAGCTGC 24.7 0.0247 P1 cortex CTCCAGCTGC GAAGCTGAAC TTCCAGCTGC 18.1 0.0181 Hypothalamus GAAGCTGTTG (3) GTGATTTTTA TTCCAGCTGC 61.5 0.0615 E12.5 retina AGGTTACTTC ATCCAGGGGT CTCCAGCTGC GAAGCTGTTG (3) GTGATTTTTA TTCCAGCTGC 73.3 0.0733 E14.5 retina CAGTCCTGGG (4) GAAGCTGAAC GAGCCTGATC GTGATTTTTA TTCCAGCTGC 32.7 0.0327 E16.5 retina ATCCAGGGGT GAAGCTGAAC GCTGCCTACA (2) TTCCAGCTGC 41.6 0.0416 E18.5 retina AGGTTACTTC ATCCAGGGGT TTCCAGCTGC 72.7 0.0727 P0.5 retina CAGTCCTGGG (4) CAGTTCTGGG (2) TCAGAGTTTT TTCCAGCTGC 64.9 0.0649 P2.5 retina ATCCAGGGGT GAAGCTGAAC TTCCAGCTGC 52.9 0.0529 P4.5 retina TTCCAGCTGC 49.5 0.0495 P6.5 retina TTCCAGCTGC 78.4 0.0784 P10.5 crx- retina GAAGCTGAAC GAGCCTGATC GCTGCCTACA (2) TTCCAGCTGC 50.3 0.0503 P10.5 crx+ retina AGGTTACTTC CAGTCCTGGG (4) GCTGCCTACA (2) TTCCAGCTGC 96.1 0.0961 Adult retinal AGGTTACTTC ATCCAGGGGT TTCCAGCTGC 89 0.089 ONL GAAGCTGAAC TTCCAGCTGC 61.3 0.0613