Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.316652	Hmgcr	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	13	13 49.0 cM	15357
Gene Ontology	biosynthesis | cholesterol biosynthesis | embryonic development | endoplasmic reticulum | hydroxymethylglutaryl-CoA reductase (NADPH) activity | hydroxymethylglutaryl-CoA reductase (NADPH) activity | integral to membrane | oxidoreductase activity
Human Homolog	HMGCR[3-hydroxy-3-methylglutaryl-Coenzyme A reductase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGGCCCTG CTGCCGCGGC GAAGATTACT (2) TTTTGTACAA 9.7 0.0097 Cb medulloblastoma CTGCCGCGGC GAAGATTACT (2) TTTTGTACAA 9.2 0.0092 P8 GC+1d culture AATGGCCCTG CTGCCGCGGC TGGCTCCATC TTTTGTACAA 20.5 0.0205 P8 GC+SHH+1d culture AATGGCCCTG CTGCCGCGGC TGGCTCCATC TTTTGTACAA 17.6 0.0176 3T3 fibroblasts AATGGCCCTG 3.5 0.0035 E15 cortex AATGGCCCTG ATCAGTGACA (2) 19.7 0.0197 P1 cortex TGGCTCCATC TTTTGTACAA 13.6 0.0136 Hypothalamus CTGCCGCGGC GAAGATTACT (2) TGGCTCCATC TTTTGTACAA 9 0.009 E12.5 retina AATGGCCCTG ATCAGTGACA (2) CTGCCGCGGC TTTTGTACAA 11.3 0.0113 E14.5 retina CTGCCGCGGC GGAGCCTCTT TGGCTCCATC TTTTGTACAA 23.6 0.0236 E16.5 retina AATGGCCCTG ATCAGTGACA (2) CTGCCGCGGC GGAGCCTCTT TTTTGTACAA 27.1 0.0271 E18.5 retina AATGGCCCTG GAAGATTACT (2) TTTTGTACAA 12.7 0.0127 P0.5 retina AATGGCCCTG TGGCTCCATC 5.9 0.0059 P2.5 retina TTTTGTACAA 3.5 0.0035 P4.5 retina AATGGCCCTG GAAGATTACT (2) TGGCTCCATC TTTTGTACAA 13.9 0.0139 P6.5 retina CTGCCGCGGC GAAGATTACT (2) 5 0.005 P10.5 crx- retina TTTTGTACAA 5.6 0.0056 P10.5 crx+ retina AATGGCCCTG ATCAGTGACA (2) CTGCCGCGGC GAAGATTACT (2) TGGCTCCATC 15.3 0.0153 Adult retinal AATGGCCCTG CTGCCGCGGC TGGCTCCATC TTTTGTACAA 13.1 0.0131 ONL AATGGCCCTG CTGCCGCGGC TGGCTCCATC TTTTGTACAA 13.4 0.0134