Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.331113	Rps3a	ribosomal protein S3a	3		20091
Gene Ontology	cytosolic ribosome (sensu Eukarya) | intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | ribosome biogenesis | structural constituent of ribosome
Human Homolog	RPS3A[ribosomal protein S3A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 153 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACTTGCCCA ACGTCTTTGT AGCTTGCCCA ATCGAAGCTC GGGAAGGCAG GGGAAGGCGG GGGAGGGCGG GGGGAAGGGC (2) GGGGAGGCGG 233.2 0.2332 Cb medulloblastoma GGGAAAGCGG GGGAAGGCAG GGGAAGGCGG GGGAAGGGGC (2) GGGAAGGTGG (2) 134.1 0.1341 P8 GC+1d culture AACTTGCCCA ACCCGAGAGG (2) GAGCTGGATG (2) GGGAAAGGCG (2) GGGAAGCCGG (2) GGGAAGGCAG GGGAAGGCGG GGGAAGGTGG (2) GGGGAAGGGC (2) 148.2 0.1482 P8 GC+SHH+1d culture AGCTTGCCCA GAGAGGATAA GCGGTCGGCA GGGAAGGCGG GGGAAGGGGC (2) GGGAAGGTGG (2) GGGAGGGCGG GGGGAAGGGC (2) 155.9 0.1559 3T3 fibroblasts AACTTGCCCA GAGCTGGATG (2) GGGAAAGGCG (2) GGGAAGGCAG GGGAAGGCGG GGGAAGGGGC (2) GGGAAGGTGG (2) GGGGAAGGGC (2) 248.8 0.2488 E15 cortex ACGTCTTTGT GGAAGGCGGC GGGAAGGCGG GGGGAAGGCG 212.6 0.2126 P1 cortex GGGAAAGCGG GGGAAGGCGG GGGAAGGGGC (2) 45.4 0.0454 Hypothalamus ACCCGAGAGG (2) ACGTCTTTGT AGCTTGCCCA GAGAGGATAA GGAAGGCGGC GGGAAGGCGA GGGAAGGCGG GGGAAGGTGG (2) 103.1 0.1031 E12.5 retina AACTTGCCCA ACCCGAGAGG (2) GAGAGGATAA GCGGTCGGCA GGGAAGGCGG GGGGAAGGGC (2) GGGGAGGCGG 227.3 0.2273 E14.5 retina AACTTGCCCA ACCCGAGAGG (2) ACGTCTTTGT ATTTCCATCA GAGAGGATAA GGGAAGGCGG GGGGAAGGCG GGGGAAGGGC (2) TTCAATATTA (11) 185.8 0.1858 E16.5 retina AACTTGCCCA ACCCGAGAGG (2) ACGTCTTTGT AGCTTGCCCA ATCGAAGCTC ATTTCCATCA GAGAGGATAA GGAAGGCGGC GGGAAGGCGA GGGAAGGCGG GGGAAGGTGG (2) GGGGAAGGCG GGGGAAGGGC (2) TTCAATATTA (11) 324 0.324 E18.5 retina AACTTGCCCA AGCTTGCCCA GAGAGGATAA GAGCTGGATG (2) GGGAAAGCGG GGGAAGGCAG GGGAAGGCGG GGGGAAGGGC (2) 163.7 0.1637 P0.5 retina AACTTGCCCA ACCCGAGAGG (2) AGCTTGCCCA ATCGAAGCTC GGAAGGCGGC GGGAAAGCGG GGGAAAGGCG (2) GGGAAGCCGG (2) GGGAAGGCGG GGGAAGGGGC (2) GGGAAGGTGG (2) GGGGAAGGCG GGGGAAGGGC (2) 245.6 0.2456 P2.5 retina AACTTGCCCA GAGAGGATAA GGGAAAGGCG (2) GGGAAGCCGG (2) GGGAAGGCGG GGGAAGGGGC (2) GGGAAGGTGG (2) GGGAGGGCGG GGGGAAGGGC (2) 137.4 0.1374 P4.5 retina ACGTCTTTGT AGCTTGCCCA GAGAGGATAA GGAAGGCGGC GGGAAGGCAG GGGAAGGCGG GGGGAAGGGC (2) 140.8 0.1408 P6.5 retina AACTTGCCCA GAGAGGATAA GGGAAGGCGG GGGAAGGTGG (2) GGGGAAGGCG GGGGAAGGGC (2) GGGGAGGCGG GTCAAGAAGA 76.8 0.0768 P10.5 crx- retina ATTTCCATCA GGGAAAGCGG GGGAAGGCGG GGGAAGGTGG (2) GGGGAAGGGC (2) 137.6 0.1376 P10.5 crx+ retina AACTTGCCCA ATCGAAGCTC GGGAAGCCGG (2) GGGAAGGCGG GGGGAAGGGC (2) GTCAAGAAGA 157.6 0.1576 Adult retinal ACGTCTTTGT GGGAAAGGCG (2) GGGAAGGCAG GGGAAGGCGG GGGGAAGGCG GGGGAAGGGC (2) GTCAAGAAGA 76.1 0.0761 ONL AACTTGCCCA ACCCGAGAGG (2) GGGAAGGCGG GGGAAGGTGG (2) GGGGAAGGGC (2) GTCAAGAAGA 45.9 0.0459