| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTCCTGAGTG GGAGGCAGAG (2)
| 4.9 | 0.0049 |
| Cb medulloblastoma | GGAGGCAGAG (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | GGAGGCAGAG (2)
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | CTCCTGAGTG
| 2.3 | 0.0023 |
| 3T3 fibroblasts | GGAGGCAGAG (2)
| 3.5 | 0.0035 |
| E15 cortex | GAGCTAAGTC (2) GGAGGCAGAG (2)
| 9.8 | 0.0098 |
| P1 cortex | CGCAACTTGG TACGGACCCT
| 18.1 | 0.0181 |
| Hypothalamus | GGAGGCAGAG (2) TACGGACCCT
| 9 | 0.009 |
| E12.5 retina | CTCCTGAGTG GGAGGCAGAG (2) TACGGACCCT
| 9.5 | 0.0095 |
| E14.5 retina | CGCAACTTGG GAGCTAAGTC (2) GGAGGCAGAG (2)
| 18.2 | 0.0182 |
| E16.5 retina | CTCCTGAGTG GGAGGCAGAG (2)
| 5.4 | 0.0054 |
| E18.5 retina | GGAGGCAGAG (2)
| 1.8 | 0.0018 |
| P0.5 retina | GCGGCACACA GGAGGCAGAG (2)
| 4 | 0.004 |
| P2.5 retina | CTCCTGAGTG GGAGGCAGAG (2) TACGGACCCT
| 17.6 | 0.0176 |
| P4.5 retina | CTCCTGAGTG GCGGCACACA GGAGGCAGAG (2) TACGGACCCT
| 15.8 | 0.0158 |
| P6.5 retina | CTCCTGAGTG GCGGCACACA GGAGGCAGAG (2)
| 11.6 | 0.0116 |
| P10.5 crx- retina | CTAGGTGGTG (3) CTCCTGAGTG
| 63.2 | 0.0632 |
| P10.5 crx+ retina | GAGCTAAGTC (2) GGAGGCAGAG (2) TACGGACCCT
| 17.3 | 0.0173 |
| Adult retinal | CGCAACTTGG GGAGGCAGAG (2) TACGGACCCT
| 9.4 | 0.0094 |
| ONL | CTCCTGAGTG GCGGCACACA GGAGGCAGAG (2) TACGGACCCT
| 13.3 | 0.0133 |