Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35345	Bat8	HLA-B associated transcript 8	17	17 18.87 cM	110147
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	BAT8[HLA-B associated transcript 8]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 27 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCACCAAG 1.6 0.0016 Cb medulloblastoma AGCTCAAAAA 2.3 0.0023 P8 GC+1d culture CTGCACCAAG 2.3 0.0023 P8 GC+1d culture AGCTCAAAAA 1.1 0.0011 P8 GC+SHH+1d culture AAAACCCGGA 1.2 0.0012 P8 GC+SHH+1d culture AGCTCAAAAA 1.2 0.0012 P8 GC+SHH+1d culture CTGCACCAAG 1.2 0.0012 3T3 fibroblasts CTGCACCAAG 7 0.007 E15 cortex CATCTGGGGA (2) 14.8 0.0148 E15 cortex AGCTCAAAAA 4.9 0.0049 E15 cortex CTGCACCAAG 4.9 0.0049 P1 cortex CTGCACCAAG 4.5 0.0045 Hypothalamus CTGCACCAAG 3.6 0.0036 E12.5 retina CTGCACCAAG 1.9 0.0019 E14.5 retina AAAACCCGGA 1.8 0.0018 E16.5 retina AAAACCCGGA 1.8 0.0018 P0.5 retina CTGCACCAAG 15.7 0.0157 P2.5 retina CTGCACCAAG 5.3 0.0053 P2.5 retina AAAACCCGGA 1.8 0.0018 P4.5 retina CTGCACCAAG 4 0.004 P4.5 retina GTGCCCAACC 4 0.004 P6.5 retina CTGCACCAAG 3.3 0.0033 P10.5 crx- retina CTGCACCAAG 1.9 0.0019 Adult retinal CTGCACCAAG 3.7 0.0037 Adult retinal GTGGGGTGGC 3.7 0.0037 Adult retinal GTGCCCAACC 1.9 0.0019 ONL GTGGGGTGGC 3.8 0.0038